ggKbase home page

13_1_20cm_2_scaffold_2233

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2233_1
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..885)
DNA (885bp) protein (295aa)
Oligosaccharide translocase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPS8_SYNAS
Oligosaccharide translocase {ECO:0000313|EMBL:ABC76272.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus acid
oligosaccharide translocase
13_1_20cm_2_scaffold_2233_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1079..1750)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000371C7C4
hypothetical protein Tax=CSP1_5_NC10
13_1_20cm_2_scaffold_2233_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1753..3210)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000379D5C5
cytoplasmic protein Tax=CSP1_5_NC10
cytoplasmic protein
13_1_20cm_2_scaffold_2233_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3210..3896)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQP6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92856.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sugar transferase
13_1_20cm_2_scaffold_2233_5
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3893..5074)
DNA (1182bp) protein (394aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate)aminotransferase) (EC:2.6.1.-) Tax=GWA1_Bdellovibrionales_52_35_curated
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate)aminotransferase) (EC:2.6.1.-)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (UDP-(Beta-L-threo-pentapyranosyl-4''-ulose diphosphate)aminotransferase) n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCR4_DICT6
13_1_20cm_2_scaffold_2233_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5295..6431)
DNA (1137bp) protein (379aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
13_1_20cm_2_scaffold_2233_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6428..7969)
DNA (1542bp) protein (514aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37620.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
NtrC family two-component response regulator
13_1_20cm_2_scaffold_2233_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8327..10753
DNA (2427bp) protein (809aa)
Putative exopolysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W1_GEMAT
Putative exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAH37621.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
putative exopolysaccharide biosynthesis protein
13_1_20cm_2_scaffold_2233_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10786..11970
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARY3_AZOBR rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD00194.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
hypothetical protein
13_1_20cm_2_scaffold_2233_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11997..12938)
DNA (942bp) protein (314aa)
Response regulator/GGDEF domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPM4_MYXFH
response regulator receiver modulated diguanylate cyclase Tax=RBG_16_Anaeromyxobacter_69_14_curated
response regulator/GGDEF domain-containing protein
13_1_20cm_2_scaffold_2233_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13783..15099
DNA (1317bp) protein (439aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
13_1_20cm_2_scaffold_2233_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15108..15848
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_2233_13
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15890..16945
DNA (1056bp) protein (352aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABC84043.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABC84043.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystob
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHI5_ANADE
13_1_20cm_2_scaffold_2233_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16950..17639
DNA (690bp) protein (230aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KU8_RHOP5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABJ07436.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_2233_15
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18543..19421
DNA (879bp) protein (293aa)
GGDEF/response regulator receiver domain protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YVG8_LYNSP
response regulator receiver modulated diguanylate cyclase Tax=RBG_13_Deltaproteobacteria_53_10_curated
response regulator receiver modulated diguanylate cyclase
13_1_20cm_2_scaffold_2233_16
unknown

Not on your lists

19660..20784
DNA (1125bp) protein (375aa)

This feature has no annotations

13_1_20cm_2_scaffold_2233_17
unknown

Not on your lists

20769..22196
DNA (1428bp) protein (476aa)

This feature has no annotations

13_1_20cm_2_scaffold_2233_trna_1
unknown

Not on your lists

22402..22475
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_2233_18
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

22760..23968
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000373747B
hypothetical protein Tax=CG_CPR04_01
hypothetical protein
13_1_20cm_2_scaffold_2233_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

23965..25155
DNA (1191bp) protein (397aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLV2_9CHLR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFH86752.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonoba
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_2_scaffold_2233_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25325..25978
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Y6_PEDSD alias=16ft_combo_ws3_scaffold_1060_55 id=5223268 tax=16ft_combo_ws3 species=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:AHG88272.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
photosynthetic reaction centre cytochrome c subunit
Displaying 21 items

View Taxonomy