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13_1_20cm_2_scaffold_2238

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2238_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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2..544
DNA (543bp) protein (181aa)
N-acyl-D-amino-acid deacylase n=1 Tax=mine drainage metagenome RepID=E6Q0C6_9ZZZZ
N-acyl-D-aspartate/D-glutamate deacylase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
N-acyl-D-amino-acid deacylase
13_1_20cm_2_scaffold_2238_2
unknown

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546..926
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_2_scaffold_2238_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1034..1990
DNA (957bp) protein (319aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK31_CHLTF
13_1_20cm_2_scaffold_2238_4
unknown

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1992..2240
DNA (249bp) protein (83aa)
hypothetical protein
13_1_20cm_2_scaffold_2238_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2257..3012
DNA (756bp) protein (252aa)
UspA domain-containing protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IX09_9GAMM
UspA domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
UspA domain-containing protein
13_1_20cm_2_scaffold_2238_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3009..3518
DNA (510bp) protein (170aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribonuclease H n=1 Tax=uncultured organism RepID=E0X765_9ZZZZ
ribonuclease H
13_1_20cm_2_scaffold_2238_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3515..4000
DNA (486bp) protein (162aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Deinococcus wulumuqiensis RepID=UPI000347E95E
CMP/dCMP deaminase
13_1_20cm_2_scaffold_2238_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4005..4661
DNA (657bp) protein (219aa)
Double zinc ribbon Tax=RBG_16_Gemmatimonadetes_66_8_curated
Double zinc ribbon
13_1_20cm_2_scaffold_2238_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4658..5686
DNA (1029bp) protein (343aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDM65964.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CDM65964.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
Putative 3-isopropylmalate dehydrogenase n=2 Tax=Myxococcus xanthus RepID=Q1DCT3_MYXXD
3-isopropylmalate dehydrogenase
13_1_20cm_2_scaffold_2238_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5761..7176
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465V8_METBF
surface antigen gene Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_2_scaffold_2238_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7310..7882
DNA (573bp) protein (191aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase alias=RBG1_508,RBG1_C00001G00508 id=1250066 tax=RBG1 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi
13_1_20cm_2_scaffold_2238_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7879..8442
DNA (564bp) protein (188aa)
putative acyltransferase (EC:2.3.1.9); K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acetyl-CoA acetyltransferase n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VEG6_9DELT
acetyl-CoA acetyltransferase
13_1_20cm_2_scaffold_2238_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8439..9278
DNA (840bp) protein (280aa)
Band 7 protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFY0_DESB2
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_2238_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9278..10147
DNA (870bp) protein (290aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_2238_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10152..11039
DNA (888bp) protein (296aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN9_9BACT
13_1_20cm_2_scaffold_2238_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11039..11608
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607D5_METCA
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_2238_17
unknown

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11608..12048
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_20cm_2_scaffold_2238_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12029..13399
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035E79D7
rocC; amino acid permease rocC Tax=RBG_16_Gemmatimonadetes_66_8_curated
rocC; amino acid permease rocC
13_1_20cm_2_scaffold_2238_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13320..14198)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000373C3C0
hypothetical protein; K09729 hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_2238_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14229..15767
DNA (1539bp) protein (513aa)
Putative FAD linked oxidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J2_GEMAT
putative FAD linked oxidase; K06911 Tax=GWC2_Gemmatimonadetes_71_10_curated
FAD linked oxidase domain protein
13_1_20cm_2_scaffold_2238_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15734..16525
DNA (792bp) protein (264aa)
thyX; thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=GWC2_Gemmatimonadetes_71_10_curated
thyX; thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J0_GEMAT
13_1_20cm_2_scaffold_2238_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16673..17737
DNA (1065bp) protein (355aa)
D-alanine-D-alanine ligase-like protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YWW1_MELRP
D-alanine-D-alanine ligase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
D-alanine-D-alanine ligase-like protein
13_1_20cm_2_scaffold_2238_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17734..18753
DNA (1020bp) protein (340aa)
ATP-grasp enzyme, D-alanine-D-alanine ligase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN96_SINAD
D-alanine--D-alanine ligase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-grasp enzyme, D-alanine-D-alanine ligase
13_1_20cm_2_scaffold_2238_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18704..19204
DNA (501bp) protein (167aa)
Acetylpolyamine aminohydrolase AphA n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G5G3_9DELT
acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N-acetyltransferase
13_1_20cm_2_scaffold_2238_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19320..20249
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI0003821674
kamA; Lysine 2,3-aminomutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kamA; Lysine 2,3-aminomutase
13_1_20cm_2_scaffold_2238_26
unknown

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comp(20424..21005)
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_20cm_2_scaffold_2238_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21406..24684
DNA (3279bp) protein (1093aa)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:BAH40123.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAH40123.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC96_GEMAT
13_1_20cm_2_scaffold_2238_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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24681..25088
DNA (408bp) protein (136aa)
Nitrogen regulatory protein P-II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A871_GEMAT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AHG93827.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
nitrogen regulatory protein P-II
13_1_20cm_2_scaffold_2238_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25085..26326
DNA (1242bp) protein (414aa)
Ammonium transporter NrgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A872_GEMAT rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-2
nrgA; ammonium transporter NrgA
Displaying 29 items

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