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13_1_20cm_2_scaffold_2295

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2295_1
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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2..322
DNA (321bp) protein (107aa)
DNA repair protein RadA n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P9Q0_9ARCH
DNA repair protein RadA {ECO:0000313|EMBL:BAJ50661.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterra
DNA repair protein RadA
13_1_20cm_2_scaffold_2295_2
RBG_16_Archaea_50_20_curated, Archaea

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343..1341
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIG8_NITGG
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Rad51
13_1_20cm_2_scaffold_2295_3
RBG_16_Archaea_50_20_curated, Archaea

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1446..2864
DNA (1419bp) protein (473aa)
polB2; DNA polymerase B (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase elongation subunit (family B) (EC:2.7.7.7)
DNA polymerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKE2_NITGG
13_1_20cm_2_scaffold_2295_4
RBG_16_Archaea_50_20_curated, Archaea

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2992..3741
DNA (750bp) protein (250aa)
polB2; DNA polymerase B (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
polB2; DNA polymerase B (EC:2.7.7.7)
DNA polymerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKE2_NITGG
13_1_20cm_2_scaffold_2295_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3839..4180
DNA (342bp) protein (114aa)
Translation initiation inhibitor n=1 Tax=Brucella neotomae 5K33 RepID=C9V5A2_BRUNE
hypothetical protein; K07567 TdcF protein Tax=RBG_16_Euryarchaeota_68_12_curated
rutC family protein
13_1_20cm_2_scaffold_2295_6
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4213..5502)
DNA (1290bp) protein (430aa)
Zinc metalloprotease n=3 Tax=Amycolatopsis mediterranei RepID=D8I3V0_AMYMU
Zinc metalloprotease {ECO:0000313|EMBL:AEK39547.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S
putative cell surface uncharacterized protein related to type IV pili
13_1_20cm_2_scaffold_2295_7
unknown

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comp(5794..6111)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_8
unknown

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6326..6814
DNA (489bp) protein (163aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_9
unknown

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comp(7000..7164)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7263..7643)
DNA (381bp) protein (127aa)
glyoxalase n=1 Tax=Bacillus vallismortis RepID=UPI0002891FC6
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glyoxalase
13_1_20cm_2_scaffold_2295_11
unknown

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8109..8285
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_12
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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8700..8981
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q05E85_AERPE
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2295_13

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8920..9504
DNA (585bp) protein (195aa)
Marine sediment metagenome DNA, contig: S12H4_C05704 {ECO:0000313|EMBL:GAI82359.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_2295_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10104..10700
DNA (597bp) protein (199aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=886738 species="Archaea; Thaumarchaeo
tmk; dTMP kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLP7_9ARCH
13_1_20cm_2_scaffold_2295_15
unknown

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comp(10716..11354)
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_16
RBG_16_Archaea_50_20_curated, Archaea

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11657..11935
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00036F9E47
hypothetical protein; K09721 hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_2295_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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12169..12918
DNA (750bp) protein (250aa)
hypothetical protein, partial n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00036633C3
Uncharacterized protein {ECO:0000313|EMBL:ETW96585.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_20cm_2_scaffold_2295_18
unknown

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12970..13431
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_19
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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13521..14381
DNA (861bp) protein (287aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDS6_ACIB4
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ADD08156.1}; ATPase, AAA family, putative {ECO:0000313|EMBL:EDY35578.1}; TaxID=439481 species="Archaea; Euryarchaeota; Acidul
ATPase AAA
13_1_20cm_2_scaffold_2295_20
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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14424..15662
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGL0_PYRYC
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2295_21
unknown

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15674..16294
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_20cm_2_scaffold_2295_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(16632..16967)
DNA (336bp) protein (112aa)
Hypothetical conserved protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2P4_9ARCH
Sjogrens syndrome scleroderma autoantigen 1; K07143 UPF0148 protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_2295_23
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

17224..19551
DNA (2328bp) protein (776aa)
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=RBG_16_Micrarchaeota_36_9_curated
ATPase AAA n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TC18_9EURY
ATPase AAA
13_1_20cm_2_scaffold_2295_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19517..20467
DNA (951bp) protein (317aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3G0_KORCO
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AIF84648.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Cand
AAA family ATPase, CDC48 subfamily
Displaying 24 items

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