ggKbase home page

13_1_20cm_2_scaffold_2310

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2310_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..165)
DNA (165bp) protein (55aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_2310_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(179..1426)
DNA (1248bp) protein (416aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Sarcosine oxidase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIP4_RUNSL
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_2310_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1423..2280)
DNA (858bp) protein (286aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein n=1 Tax=Streptomyces sp. CNT302 RepID=UPI000364CD3B
dihydrodipicolinate synthetase
13_1_20cm_2_scaffold_2310_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2301..3125)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase 2
13_1_20cm_2_scaffold_2310_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3074..3874)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase 2
13_1_20cm_2_scaffold_2310_6
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3963..4691
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4RCR8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ89188.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
hypothetical protein
13_1_20cm_2_scaffold_2310_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4688..5485)
DNA (798bp) protein (266aa)
ABC-2 type transporter n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1I7_NITHN
multidrug ABC transporter; K09686 antibiotic transport system permease protein Tax=CSP1_5_NC10
multidrug ABC transporter
13_1_20cm_2_scaffold_2310_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5488..6240)
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00037C50C5
daunorubicin resistance ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein Tax=CSP1_5_NC10
daunorubicin resistance ABC transporter ATPase subunit
13_1_20cm_2_scaffold_2310_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6237..7349)
DNA (1113bp) protein (371aa)
pyrroloquinoline quinone biosynthesis protein PqqE n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003653C9B
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1254432 species="Bacteria; Proteobacteria;
hypothetical protein
13_1_20cm_2_scaffold_2310_10
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7339..7626)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036C39D1
Coenzyme PQQ synthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; Pyrroloquinoline quinone biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; TaxID=305700 species="Bacteria; Proteobacteria; B
hypothetical protein
13_1_20cm_2_scaffold_2310_11
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7623..8336)
DNA (714bp) protein (238aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinolin
Coenzyme PQQ synthesis protein C n=2 Tax=Saccharopolyspora erythraea RepID=A4FI40_SACEN
pqqC; pyrroloquinoline quinone biosynthesis protein PqqC
13_1_20cm_2_scaffold_2310_12
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8333..9088)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000365EF04
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1245923 species="Bacteria; Cyanobacteria; N
pyrroloquinoline quinone biosynthesis protein PqqB
13_1_20cm_2_scaffold_2310_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(9479..10882)
DNA (1404bp) protein (468aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML24_9BACT
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator {ECO:0000313|EMBL:CBE69866.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candi
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_20cm_2_scaffold_2310_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10879..12423)
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBE69867.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylo
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML25_9BACT
13_1_20cm_2_scaffold_2310_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12451..13665)
DNA (1215bp) protein (405aa)
putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
putative aminotransferase
13_1_20cm_2_scaffold_2310_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13625..14467)
DNA (843bp) protein (281aa)
putative methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
13_1_20cm_2_scaffold_2310_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14464..14925)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39084.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
Displaying 17 items

View Taxonomy