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13_1_20cm_2_scaffold_2314

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2314_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2..127
DNA (126bp) protein (42aa)
nucleoside transporter NupC n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00036BC6E9
Na+ dependent nucleoside transporter; K03317 concentrative nucleoside transporter, CNT family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Na+ dependent nucleoside transporter
13_1_20cm_2_scaffold_2314_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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199..936
DNA (738bp) protein (246aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ0_GEMAT
13_1_20cm_2_scaffold_2314_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(911..1645)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7F
Uncharacterized protein {ECO:0000313|EMBL:ELZ35110.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
13_1_20cm_2_scaffold_2314_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1660..2469)
DNA (810bp) protein (270aa)
Phosphomethylpyrimidine kinase n=1 Tax=Thermus oshimai JL-2 RepID=K7R8B5_THEOS
phosphomethylpyrimidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphomethylpyrimidine kinase
13_1_20cm_2_scaffold_2314_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2570..3280
DNA (711bp) protein (237aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B408_DESCC
rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA/rRNA methyltransferase (SpoU)
13_1_20cm_2_scaffold_2314_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3270..4058
DNA (789bp) protein (263aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
13_1_20cm_2_scaffold_2314_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4064..4855
DNA (792bp) protein (264aa)
Chaperone protein ClpB n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DUW1_SULAA
AAA ATPase central domain protein {ECO:0000313|EMBL:AHG91368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
AAA ATPase central domain protein
13_1_20cm_2_scaffold_2314_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4852..5202
DNA (351bp) protein (117aa)
AAA ATPase central domain protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_2314_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5255..6379
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2314_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6427..7722
DNA (1296bp) protein (432aa)
Signal recognition particle protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY3_GEMAT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadete
Signal recognition 54 kDa protein
13_1_20cm_2_scaffold_2314_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7730..7987
DNA (258bp) protein (86aa)
30S ribosomal protein S16 n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QIA7_9FIRM
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsP; 30S ribosomal protein S16
13_1_20cm_2_scaffold_2314_12
unknown

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8032..8256
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_2_scaffold_2314_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8243..8941
DNA (699bp) protein (233aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW8_GEMAT
tRNA (guanine-N(1)-)-methyltransferase
13_1_20cm_2_scaffold_2314_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


8954..9334
DNA (381bp) protein (127aa)
50S ribosomal protein L19 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPA9_KYRT2
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
50S ribosomal protein L19
13_1_20cm_2_scaffold_2314_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9331..9975
DNA (645bp) protein (215aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease H (EC:3.1.26.4)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036E2CDF
13_1_20cm_2_scaffold_2314_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9993..11744)
DNA (1752bp) protein (584aa)
DNA polymerase III n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B62325
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RBG_16_Gemmatimonadetes_66_8_curated
PHP domain-containing protein
13_1_20cm_2_scaffold_2314_17
unknown

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11894..13261
DNA (1368bp) protein (456aa)

This feature has no annotations

13_1_20cm_2_scaffold_2314_18
unknown

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13403..14425
DNA (1023bp) protein (341aa)

This feature has no annotations

13_1_20cm_2_scaffold_2314_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(14999..15835)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJW3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84975.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_2_scaffold_2314_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15852..16292)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2514
methyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
methyltransferase
Displaying 20 items

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