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13_1_20cm_2_scaffold_2339

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2339_1

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comp(2..595)
DNA (594bp) protein (198aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4A1_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKM17521.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HAD-superfamily hydrolase
13_1_20cm_2_scaffold_2339_2
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(592..1368)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VTZ7_PAETH
hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
hypothetical protein
13_1_20cm_2_scaffold_2339_3
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(1365..2837)
DNA (1473bp) protein (491aa)
lysU; lysyl-tRNA synthetase (class II); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RBG_16_Chloroflexi_64_32_curated
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8W1_AMMDK
13_1_20cm_2_scaffold_2339_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(2901..3368)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GJQ2_9FIRM
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RBG_16_Chloroflexi_64_32_curated
transcription elongation factor GreA
13_1_20cm_2_scaffold_2339_5
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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3607..5817
DNA (2211bp) protein (737aa)
ydhD; peptidoglycan hydrolase Tax=RBG_16_Chloroflexi_64_32_curated
13_1_20cm_2_scaffold_2339_6

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5836..6396
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C502_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKL52640.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_2339_7

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6407..6889
DNA (483bp) protein (161aa)
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S326_THEOJ
Uncharacterized protein {ECO:0000313|EMBL:KKL52639.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_2339_8

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6962..7453
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003706DD8
Uncharacterized protein {ECO:0000313|EMBL:KKL52638.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_2339_9

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comp(7450..9414)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9X4_METMS
Uncharacterized protein {ECO:0000313|EMBL:KKK89996.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_2339_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(9416..9907)
DNA (492bp) protein (164aa)
Marine sediment metagenome DNA, contig: S01H1_S21872 Tax=RBG_16_Chloroflexi_64_32_curated
13_1_20cm_2_scaffold_2339_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(9910..10641)
DNA (732bp) protein (244aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA64_SPHTD
Methyltransferase type 11 {ECO:0000313|EMBL:ACZ40707.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sou
methyltransferase type 11
13_1_20cm_2_scaffold_2339_12
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(10753..13221)
DNA (2469bp) protein (823aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_13_Chloroflexi_60_13_curated
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=SYL_RUBXD rbh
13_1_20cm_2_scaffold_2339_13
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(13214..13756)
DNA (543bp) protein (181aa)
MgtC family protein n=2 Tax=Geobacter metallireducens RepID=Q39U64_GEOMG
MgtC/SapB transporter Tax=RBG_16_Chloroflexi_64_32_curated
MgtC family protein
13_1_20cm_2_scaffold_2339_trna_1
unknown

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comp(14088..14160)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_2339_14

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14261..15430
DNA (1170bp) protein (390aa)
dol:Dole_1554 L-carnitine dehydratase/bile acid-inducible protein F; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4] alias=scaffold_2_25,RBG2_C00002G00025 id=1241307 tax=RBG2 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
Uncharacterized protein {ECO:0000313|EMBL:KKL15751.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
L-carnitine dehydratase/bile acid-inducible protein F
13_1_20cm_2_scaffold_2339_15
unknown

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comp(15514..15690)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 16 items

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