ggKbase home page

13_1_20cm_2_scaffold_2348

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2348_1
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

3..236
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036EE80D
DoxX; K15977 putative oxidoreductase Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein
13_1_20cm_2_scaffold_2348_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

233..817
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2Q3H4_9CAUL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_2_scaffold_2348_3
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(890..1327)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein alias=RBG1_714,RBG1_C00001G00714 id=1250272 tax=RBG1 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres
hypothetical protein
13_1_20cm_2_scaffold_2348_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1726..2814)
DNA (1089bp) protein (363aa)
alanine racemase n=1 Tax=Burkholderia bryophila RepID=UPI00035CDE47
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
putative serine dehydratase domain protein
13_1_20cm_2_scaffold_2348_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2837..4192)
DNA (1356bp) protein (452aa)
Xaa-Pro aminopeptidase family enzyme n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CMA0_MYXFH
Xaa-Pro aminopeptidase family enzyme Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M24
13_1_20cm_2_scaffold_2348_6
unknown

Not on your lists

comp(4189..5328)
DNA (1140bp) protein (380aa)
hypothetical protein
13_1_20cm_2_scaffold_2348_7
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5328..5723)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1AE41_9ZZZZ
hypothetical protein; K08972 putative membrane protein Tax=RBG_16_Gamma2_64_11_curated
hypothetical protein
13_1_20cm_2_scaffold_2348_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5720..6205)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DFE8_9BACL alias=16ft_combo_ws3_scaffold_775_43 id=5225614 tax=16ft_combo_ws3 species=Brevibacillus borstelensis AK1 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
metal-dependent hydrolase
13_1_20cm_2_scaffold_2348_9
unknown

Not on your lists

comp(6282..6671)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_2_scaffold_2348_10
unknown

Not on your lists

comp(6851..7081)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_2_scaffold_2348_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7124..7966
DNA (843bp) protein (281aa)
Cyclase family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK67_RHOMR
Cyclase family protein {ECO:0000313|EMBL:AEN72823.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
cyclase family protein
13_1_20cm_2_scaffold_2348_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7993..8427)
DNA (435bp) protein (145aa)
Isopenicillin N epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ1_GEMAT
class V aminotransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase class V
13_1_20cm_2_scaffold_2348_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9225..9593)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIC5_ACCPU
h16_A3595; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2348_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9674..10822)
DNA (1149bp) protein (383aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_2348_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10948..12006)
DNA (1059bp) protein (353aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT
tRNA-specific 2-thiouridylase mnmA
13_1_20cm_2_scaffold_2348_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12003..13184)
DNA (1182bp) protein (394aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G3_GEMAT
Aminotransferase class V {ECO:0000313|EMBL:AHG90429.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
aminotransferase class V
13_1_20cm_2_scaffold_2348_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13203..13925)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G7_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_2348_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14071..15315)
DNA (1245bp) protein (415aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_2348_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15312..15635)
DNA (324bp) protein (108aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H5_GEMAT
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_2348_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15638..16492)
DNA (855bp) protein (285aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGQ9_CHLTF
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_2348_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16638..17513)
DNA (876bp) protein (292aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38186.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
hypothetical membrane protein
Displaying 21 items

View Taxonomy