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13_1_20cm_2_scaffold_2470

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2470_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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68..1741
DNA (1674bp) protein (558aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV1_KORVE
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92267.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
13_1_20cm_2_scaffold_2470_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1742..2449)
DNA (708bp) protein (236aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_20cm_2_scaffold_2470_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2492..2974
DNA (483bp) protein (161aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_2470_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2990..3379)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_1_20cm_2_scaffold_2470_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3710..4735
DNA (1026bp) protein (342aa)
alias=gwe2_scaffold_8_567 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alias=gwe2_scaffold_8_567 id=2167413 tax=TA06
13_1_20cm_2_scaffold_2470_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4737..5564
DNA (828bp) protein (276aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Prochlorococcus marinus (strain MIT 9313) RepID=Q7V604_PROMM
Ribosomal RNA small subunit methyltransferase I
13_1_20cm_2_scaffold_2470_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5561..6229
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF4159
13_1_20cm_2_scaffold_2470_8
unknown

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comp(7039..7632)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_20cm_2_scaffold_2470_9
unknown

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comp(7861..8142)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_2_scaffold_2470_10
unknown

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comp(8209..8520)
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_2_scaffold_2470_11
unknown

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comp(8530..8889)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_2_scaffold_2470_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9395..9991
DNA (597bp) protein (199aa)
Tetratricopeptide repeat protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_2470_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10096..11127
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T6_GEMAT
Tetratricopeptide repeat protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2470_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11124..12407
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T7_GEMAT rbh
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_2470_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12404..14887
DNA (2484bp) protein (828aa)
dinG; putative ATP-dependent DNA helicase (EC:3.6.1.-); K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T8_GEMAT
helicase c2
13_1_20cm_2_scaffold_2470_16
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14906..15208
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRD5_KORVE
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
13_1_20cm_2_scaffold_2470_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15209..16378
DNA (1170bp) protein (390aa)
aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I6_GEMAT rbh
aminotransferase class I and II
13_1_20cm_2_scaffold_2470_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16437..17207
DNA (771bp) protein (257aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_2470_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17214..18449
DNA (1236bp) protein (412aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02DB3_SOLUE
Amidohydrolase {ECO:0000313|EMBL:AHG88575.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase
13_1_20cm_2_scaffold_2470_20
RLO_PLX_64_10, Bacteria

Not on your lists

comp(18513..18968)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B30A1E
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
CHRD domain containing protein
13_1_20cm_2_scaffold_2470_21
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

Not on your lists

comp(19055..19444)
DNA (390bp) protein (130aa)
Putative Cupredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CSF8_THIA3
PKD domain-containing protein Tax=RBG_13_RIF08_66_14_curated
putative Cupredoxin
13_1_20cm_2_scaffold_2470_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19441..20511)
DNA (1071bp) protein (357aa)
Plastocyanin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQR1_KORVE
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AHG89356.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
blue (type 1) copper domain protein
13_1_20cm_2_scaffold_2470_23
Synechococcus sp. WH 8109, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21164..21697
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii 696 RepID=K8CRJ6_CROSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF63086.1}; TaxID=166314 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 8109.;"
13_1_20cm_2_scaffold_2470_trna_1
unknown

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comp(21743..21833)
DNA (91bp)
transferRNA
13_1_20cm_2_scaffold_2470_24
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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comp(21861..23360)
DNA (1500bp) protein (500aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1G1_9CYAN
Putative protease with the C-terminal PDZ domain {ECO:0000313|EMBL:AFY76001.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
putative protease with the C-terminal PDZ domain
13_1_20cm_2_scaffold_2470_25
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(23471..23782)
DNA (312bp) protein (104aa)
Tax=GWA2_Ignavibacteria_54_16_curated
Displaying 26 items

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