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13_1_20cm_2_scaffold_2485

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2485_trna_1
unknown

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9..99
DNA (91bp)
transferRNA
13_1_20cm_2_scaffold_2485_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(230..3319)
DNA (3090bp) protein (1030aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZI5_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ84930.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_2_scaffold_2485_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3336..5108)
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037036D2
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
transcriptional regulator domain-containing protein
13_1_20cm_2_scaffold_2485_3
unknown

Not on your lists

5369..6007
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_20cm_2_scaffold_2485_4
RLO_PLX_64_10, Bacteria

Not on your lists

6134..8266
DNA (2133bp) protein (711aa)
Conserved hypothetical secreted protein, containing WD40-like beta propeller repeats n=1 Tax=uncultured archaeon RepID=D1JC26_9ARCH
WD-40-like beta propeller repeat-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
WD40-like beta Propeller containing protein
13_1_20cm_2_scaffold_2485_5
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8283..9053
DNA (771bp) protein (257aa)
DSBA oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
DSBA oxidoreductase
DSBA oxidoreductase alias=gwa2_scaffold_226_57 id=5042829 tax=GW2011_AR20 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota organism_desc=DELETE: see complete genome
13_1_20cm_2_scaffold_2485_6
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

9066..11495
DNA (2430bp) protein (810aa)
Hemolysin-type calcium-binding region n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UI42_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AFZ22773.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
hypothetical protein
13_1_20cm_2_scaffold_2485_7
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11548..12219
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI000373FCB2
Alpha/beta hydrolase {ECO:0000313|EMBL:KIZ16436.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
alpha/beta hydrolase
13_1_20cm_2_scaffold_2485_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12607..14226
DNA (1620bp) protein (540aa)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ACB75101.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ACB75101.1};; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opituta
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWZ0_OPITP
13_1_20cm_2_scaffold_2485_9
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(14358..16448)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH93_THET1
Uncharacterized protein {ECO:0000313|EMBL:ACZ43114.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
hypothetical protein
13_1_20cm_2_scaffold_2485_10

Not on your lists

17928..18758
DNA (831bp) protein (277aa)
Amidohydrolase 2 n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D3L1_PAESJ rbh
Marine sediment metagenome DNA, contig: S06H3_C01019 {ECO:0000313|EMBL:GAH91114.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
amidohydrolase 2
13_1_20cm_2_scaffold_2485_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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18798..20513
DNA (1716bp) protein (572aa)
Altronate dehydratase {ECO:0000313|EMBL:CDM65034.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CDM65034.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
D-galactarate dehydratase/altronate hydrolase family protein, insertion n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5U9_ACIC5
D-galactarate dehydratase/altronate hydrolase family protein, insertion
13_1_20cm_2_scaffold_2485_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20582..21364
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BT20_9BACT
Short chain dehydrogenase {ECO:0000313|EMBL:AHM59457.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovir
short chain dehydrogenase
13_1_20cm_2_scaffold_2485_13
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21377..22723
DNA (1347bp) protein (449aa)
L-fucose transporter n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVM0_EMTOG rbh
L-fucose transporter {ECO:0000313|EMBL:AFK03723.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotroph
L-fucose transporter
13_1_20cm_2_scaffold_2485_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22720..23058
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4I5_HALH1
Uncharacterized protein {ECO:0000313|EMBL:AEE51986.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
hypothetical protein
13_1_20cm_2_scaffold_2485_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23274..25823
DNA (2550bp) protein (850aa)
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:CDM65133.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CDM65133.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000363C175 rbh
glucan 1,4-beta-glucosidase
13_1_20cm_2_scaffold_2485_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25884..26825
DNA (942bp) protein (314aa)
Cellobiose phosphotransferase system YdjC-like protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DFU2_9BACT
YdjC family protein {ECO:0000313|EMBL:AHG88173.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
YdjC family protein
13_1_20cm_2_scaffold_2485_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26915..27370
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITV5_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39695.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_2_scaffold_2485_18
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27593..28072
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WVW3_ACISM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1198114 species="Bacteri
GreA/GreB family elongation factor
13_1_20cm_2_scaffold_2485_19
unknown

Not on your lists

28132..28452
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_2_scaffold_2485_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

28605..29540
DNA (936bp) protein (312aa)
asparaginase family protein; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Asparaginase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AZK5_HERA2
asparaginase
13_1_20cm_2_scaffold_2485_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29840..30205
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A3308
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABF41720.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_2_scaffold_2485_22
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30357..30833
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NRB6_CHRVO
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ61529.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
hypothetical protein
13_1_20cm_2_scaffold_2485_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(31214..31648)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-1 RepID=A6YFN2_9MICC
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
13_1_20cm_2_scaffold_2485_24
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(31656..32819)
DNA (1164bp) protein (388aa)
Putative Zn peptidase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I681_METCZ
Putative Zn peptidase {ECO:0000313|EMBL:AFD00728.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (s
Zn peptidase
13_1_20cm_2_scaffold_2485_25
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

33066..33707
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C8583
Putative esterase {ECO:0000313|EMBL:AIE85980.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli
putative esterase
Displaying 26 items

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