ggKbase home page

13_1_20cm_2_scaffold_263

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_263_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(201..710)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6P9E3_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_263_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(741..1415)
DNA (675bp) protein (225aa)
Putative amidohydrolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC05_9EURY
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_20cm_2_scaffold_263_3
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

1721..5170
DNA (3450bp) protein (1150aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_13_Euryarchaeota_57_23_curated
hypothetical protein
13_1_20cm_2_scaffold_263_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5191..5820)
DNA (630bp) protein (210aa)
methyltransferase (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12W29_METBU
ribosomal L11 methyltransferase; K07579 putative methylase Tax=RBG_16_Bathyarchaeota_48_13_curated
13_1_20cm_2_scaffold_263_5
unknown

Not on your lists


comp(5822..6829)
DNA (1008bp) protein (336aa)
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 Tax=AR20
Diphthamide synthase, subunit DPH2
diphthamide synthase, subunit DPH2; K07561 diphthamide synthase subunit DPH2 alias=gwa2_scaffold_32_156 id=5040024 tax=GW2011_AR20 species=Methanobrevibacter smithii genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_desc=DELETE: see complete genome
13_1_20cm_2_scaffold_263_6
unknown

Not on your lists

6962..7339
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_2_scaffold_263_7
unknown

Not on your lists

7417..7887
DNA (471bp) protein (157aa)
hypothetical protein
13_1_20cm_2_scaffold_263_8
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

7962..9170
DNA (1209bp) protein (403aa)
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-) Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
monooxygenase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B19E
13_1_20cm_2_scaffold_263_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

9194..9835
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCR0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88174.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
13_1_20cm_2_scaffold_263_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(9866..10207)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T5A0_9EURY
Uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_263_11
unknown

Not on your lists

comp(10509..11258)
DNA (750bp) protein (250aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE
13_1_20cm_2_scaffold_263_12
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(11261..13630)
DNA (2370bp) protein (790aa)
Exonuclease SbcCD, C subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X1_9ARCH
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:BAJ48040.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
exonuclease SbcCD, C subunit
13_1_20cm_2_scaffold_263_13
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(13627..14781)
DNA (1155bp) protein (385aa)
Exonuclease SbcCD, D subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X0_9ARCH
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:BAJ48039.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
exonuclease SbcCD, D subunit
13_1_20cm_2_scaffold_263_14
unknown

Not on your lists

15011..15445
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_2_scaffold_263_15
unknown

Not on your lists

comp(15490..16608)
DNA (1119bp) protein (373aa)

This feature has no annotations

13_1_20cm_2_scaffold_263_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(17221..17877)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000381FE34
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_263_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17993..18895)
DNA (903bp) protein (301aa)
cation diffusion facilitator family transporter Tax=RBG_16_Deltaproteobacteria_54_11_curated
Cobalt-zinc-cadmium resistance protein CzcD alias=gwe2_scaffold_8_358 id=2166951 tax=TA06 species=Myxococcales genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
cation efflux family protein
13_1_20cm_2_scaffold_263_18
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(19196..19813)
DNA (618bp) protein (206aa)
Rhomboid family protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REN6_ARCPA
Rhomboid family protein {ECO:0000313|EMBL:ADB58580.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (
rhomboid family protein
13_1_20cm_2_scaffold_263_19
unknown

Not on your lists

19937..20437
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_2_scaffold_263_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

20686..22605
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI000376A102
putative hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
cell surface protein
Displaying 20 items

View Taxonomy