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13_1_20cm_2_scaffold_269

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_269_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

92..2353
DNA (2262bp) protein (754aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035FF96F rbh
Surface antigen (D15) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
outer membrane protein
13_1_20cm_2_scaffold_269_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2363..2941
DNA (579bp) protein (193aa)
Putative Outer membrane chaperone Skp (OmpH) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG29_9BACT
outer membrane chaperone Skp; K06142 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
membrane protein
13_1_20cm_2_scaffold_269_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3029..3886
DNA (858bp) protein (286aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lpxA; putative acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G3F0_9CYAN
13_1_20cm_2_scaffold_269_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3886..4914
DNA (1029bp) protein (343aa)
Oxidoreductase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z8X8_9BACT
oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
oxidoreductase
13_1_20cm_2_scaffold_269_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4893..5693
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037A5CBC
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_269_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5642..6841
DNA (1200bp) protein (400aa)
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lpxB; Lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG23_9BACT
13_1_20cm_2_scaffold_269_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6935..7591
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPI2_TISMK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_269_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7591..8889
DNA (1299bp) protein (433aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=GWA2_Rokubacteria_73_35_curated
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG21_9BACT
13_1_20cm_2_scaffold_269_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8886..9968
DNA (1083bp) protein (361aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=GWA2_Rokubacteria_73_35_curated
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=LPXK_SYNAS
13_1_20cm_2_scaffold_269_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9959..10957
DNA (999bp) protein (333aa)
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
ADP-heptose--LPS heptosyltransferase II (Modular protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG18_9BACT
13_1_20cm_2_scaffold_269_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10954..12072
DNA (1119bp) protein (373aa)
Glycosyl transferase, group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL49_ANADE
group 1 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
group 1 glycosyl transferase
13_1_20cm_2_scaffold_269_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12087..13193
DNA (1107bp) protein (369aa)
putative phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Putative Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHI8_9BACT
13_1_20cm_2_scaffold_269_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13190..14320
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037C4621
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1
13_1_20cm_2_scaffold_269_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14387..15610
DNA (1224bp) protein (408aa)
group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003612252
glucuronic acid transferase WabG
13_1_20cm_2_scaffold_269_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15666..16223
DNA (558bp) protein (186aa)
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Rok
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS6_CHLTF
13_1_20cm_2_scaffold_269_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16220..17218
DNA (999bp) protein (333aa)
Bifunctional protein HldE n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IKT1_9FIRM
D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-beta-D-heptose 7-phosphate kinase
13_1_20cm_2_scaffold_269_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17324..17788
DNA (465bp) protein (155aa)
Cytidyltransferase-related domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC4_CHLTF
cytidyltransferase-related domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
cytidyltransferase-related domain-containing protein
13_1_20cm_2_scaffold_269_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17785..18792
DNA (1008bp) protein (336aa)
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ADP-heptose:LPS heptosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA7_CHLTF
ADP-heptose--LPS heptosyltransferase
13_1_20cm_2_scaffold_269_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18851..19486
DNA (636bp) protein (212aa)
Glycosyl transferase family 2 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH45_DESAR
family 2 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_269_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19486..20478
DNA (993bp) protein (331aa)
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML78_9BACT
13_1_20cm_2_scaffold_269_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20475..21263
DNA (789bp) protein (263aa)
Chromosome segregation and condensation protein ScpA n=2 Tax=Geobacter sulfurreducens RepID=D7AJR2_GEOSK alias=16ft_combo_ws3_scaffold_92_85 id=5225861 tax=16ft_combo_ws3 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
segregation and condensation protein A
13_1_20cm_2_scaffold_269_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21247..21852
DNA (606bp) protein (202aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYC0_9BACT
scpB; Segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scpB; Segregation and condensation protein B
13_1_20cm_2_scaffold_269_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21986..22522
DNA (537bp) protein (179aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rluB; pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08MY5_STIAD
13_1_20cm_2_scaffold_269_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22592..22678
DNA (87bp) protein (29aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=GWA2_Rokubacteria_70_23_cura
Displaying 24 items

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