ggKbase home page

13_1_20cm_2_scaffold_2706

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2706_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

57..470
DNA (414bp) protein (138aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=MURA_ANAD2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
13_1_20cm_2_scaffold_2706_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

467..1165
DNA (699bp) protein (233aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI03_9BACT
13_1_20cm_2_scaffold_2706_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1162..2475
DNA (1314bp) protein (438aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol dehydrogenase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B39AAD
histidinol dehydrogenase
13_1_20cm_2_scaffold_2706_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2472..3077
DNA (606bp) protein (202aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=7 Tax=Clostridium thermocellum RepID=HIS7_CLOTH
13_1_20cm_2_scaffold_2706_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3074..3814
DNA (741bp) protein (247aa)
imidazole glycerol phosphate synthase subunit hisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Desulfotomaculum RepID=F6B7V3_DESCC
imidazole glycerol phosphate synthase subunit hisH
13_1_20cm_2_scaffold_2706_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3811..4557
DNA (747bp) protein (249aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=HIS4_HAHCH
13_1_20cm_2_scaffold_2706_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4558..5337
DNA (780bp) protein (260aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=HIS6_GEOUR
imidazole glycerol phosphate synthase subunit HisF
13_1_20cm_2_scaffold_2706_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5334..5987
DNA (654bp) protein (218aa)
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RIFCSPLOWO2_02_FULL_
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU68_RUBXD
13_1_20cm_2_scaffold_2706_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6120..6440
DNA (321bp) protein (107aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_2706_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6440..7201
DNA (762bp) protein (254aa)
Toluene transporter subunit: membrane component of ABC superfamily n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK80_9BACT
yrbE; toluene ABC transporter subunit membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
yrbE; toluene ABC transporter subunit membrane protein
13_1_20cm_2_scaffold_2706_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7207..7950
DNA (744bp) protein (248aa)
ABC transporter, ATPase subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJ01_ANADE
ABC transporter ATPase; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATPase
13_1_20cm_2_scaffold_2706_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7950..9140
DNA (1191bp) protein (397aa)
ABC transport system substrate-binding protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TD3_STIAD
Mce family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_2706_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9316..10488
DNA (1173bp) protein (391aa)
DNA repair protein radA n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0V8_PELCD
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=GWA2_Rokubacteria_73_35_curated
radA; DNA repair protein RadA
13_1_20cm_2_scaffold_2706_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10501..11184
DNA (684bp) protein (228aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Laceyella sacchari RepID=UPI0003B58CC8
13_1_20cm_2_scaffold_2706_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11181..11660
DNA (480bp) protein (160aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=GWA2_Rokubacteria_73_35_curated
Bifunctional enzyme IspD/IspF n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTI4_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
13_1_20cm_2_scaffold_2706_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11657..13048
DNA (1392bp) protein (464aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=GWA2_Rokubacteria_73_35_curated
Cysteine--tRNA ligase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=SYC_GEOSL
cysS; cysteinyl-tRNA ligase
13_1_20cm_2_scaffold_2706_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13048..13821
DNA (774bp) protein (258aa)
rRNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0Z2_DESRM
RNA methyltransferase
13_1_20cm_2_scaffold_2706_trna_1
unknown

Not on your lists

13839..13910
DNA (72bp)
transferRNA
Displaying 18 items

View Taxonomy