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13_1_20cm_2_scaffold_2784

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2784_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..331)
DNA (330bp) protein (110aa)
Curli production assembly/transport component CsgG n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPN7_KORVE
curli production assembly/transport component CsgG Tax=RBG_16_Gemmatimonadetes_66_8_curated
curli production assembly/transport component CsgG
13_1_20cm_2_scaffold_2784_trna_1
unknown

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691..763
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_2784_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

780..1547
DNA (768bp) protein (256aa)
histidinol-phosphate phosphatase (EC:3.1.3.15); K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Histidinol-phosphate phosphatase n=1 Tax=Frankia sp. CN3 RepID=G6HHN8_9ACTO
histidinol-phosphate phosphatase
13_1_20cm_2_scaffold_2784_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1544..1798
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=B4UGH2_ANASK
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cysteine-rich CPXCG protein
13_1_20cm_2_scaffold_2784_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1801..2454)
DNA (654bp) protein (218aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003614830
13_1_20cm_2_scaffold_2784_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2604..3314
DNA (711bp) protein (237aa)
PF06181 domain protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3W077_9LEPT
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_20cm_2_scaffold_2784_6

Not on your lists

3349..4053
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM06684.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB family protein
13_1_20cm_2_scaffold_2784_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4060..5130
DNA (1071bp) protein (357aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5T8_SPHTD
ABC transporter related protein {ECO:0000313|EMBL:ACZ39490.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
ABC transporter
13_1_20cm_2_scaffold_2784_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5512..6348
DNA (837bp) protein (279aa)
Extracellular solute-binding protein family 1 n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFJ1_KOSOT
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
extracellular solute-binding protein family 1
13_1_20cm_2_scaffold_2784_9
unknown

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6345..7424
DNA (1080bp) protein (360aa)

This feature has no annotations

13_1_20cm_2_scaffold_2784_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7429..8124
DNA (696bp) protein (232aa)
ABC transporter permease protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FUY6_9CLOT
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
sugar ABC transporter permease
13_1_20cm_2_scaffold_2784_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8117..8935
DNA (819bp) protein (273aa)
ABC-type sugar transport system, permease component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A798_DEIPD
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sugar ABC transporter permease
13_1_20cm_2_scaffold_2784_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8932..11592)
DNA (2661bp) protein (887aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
alpha-galactosidase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00035ED4C8
alpha-galactosidase-like protein
13_1_20cm_2_scaffold_2784_13
unknown

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11675..12232
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_20cm_2_scaffold_2784_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12244..13800
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_20cm_2_scaffold_2784_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13797..14465
DNA (669bp) protein (223aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_20cm_2_scaffold_2784_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14467..15147
DNA (681bp) protein (227aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-binding region ATPase domain protein
Displaying 17 items

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