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13_1_20cm_2_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_290_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..399
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MJ0042 family finger-like protein
13_1_20cm_2_scaffold_290_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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520..1518
DNA (999bp) protein (333aa)
Protein chain release factor B n=1 Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C880_9BACT rbh
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptide chain release factor 2
13_1_20cm_2_scaffold_290_3

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1515..2987
DNA (1473bp) protein (491aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX61_9BACT rbh
Lysyl-tRNA synthetase
13_1_20cm_2_scaffold_290_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2984..4321
DNA (1338bp) protein (446aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX60_9BACT
lolC; lipoprotein releasing system transmembrane protein LolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_290_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4318..5019
DNA (702bp) protein (234aa)
lolD; lipoprotein releasing system ATP-binding protein LolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=uncultured bacterium W5-51b RepID=H9BX59_9BACT
ABC transporter related protein
13_1_20cm_2_scaffold_290_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5019..5516
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX58_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_290_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5513..6586
DNA (1074bp) protein (358aa)
hypothetical protein; K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP:guanido phosphotransferase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX57_9BACT
ATP:guanido phosphotransferase, catalytic domain-containing protein
13_1_20cm_2_scaffold_290_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6599..9079
DNA (2481bp) protein (827aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R6_GEMAT
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase AAA-2 domain protein
13_1_20cm_2_scaffold_290_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9076..11472
DNA (2397bp) protein (799aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
surface antigen; K07277 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
outer membrane protein assembly complex, YaeT protein
13_1_20cm_2_scaffold_290_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11535..12077
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E1_9BACT
outer membrane chaperone skp (omph); K06142 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane chaperone Skp (OmpH)
13_1_20cm_2_scaffold_290_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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12092..13132
DNA (1041bp) protein (347aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_20cm_2_scaffold_290_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13158..14405
DNA (1248bp) protein (416aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyri
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
13_1_20cm_2_scaffold_290_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14402..15169
DNA (768bp) protein (256aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
13_1_20cm_2_scaffold_290_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15166..16149
DNA (984bp) protein (328aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oxidoreductase domain protein
13_1_20cm_2_scaffold_290_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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16146..17273
DNA (1128bp) protein (376aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_1_20cm_2_scaffold_290_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17270..17923
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4M9_9PROT alias=16ft_combo_ws3_scaffold_16_111 id=5224129 tax=16ft_combo_ws3 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_1_20cm_2_scaffold_290_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17920..18549
DNA (630bp) protein (210aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_1_20cm_2_scaffold_290_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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18509..18886
DNA (378bp) protein (126aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GI00_9LEPT
lpxK; tetraacyldisaccharide 4'-kinase
13_1_20cm_2_scaffold_290_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18897..20204
DNA (1308bp) protein (436aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSQ3_GRAMM
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_2_scaffold_290_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20204..20629
DNA (426bp) protein (142aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX96_SORCE
50S rRNA methyltransferase
13_1_20cm_2_scaffold_290_21
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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20583..21176
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPB4_SPITD
Uncharacterized protein {ECO:0000313|EMBL:ADN01308.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972
hypothetical protein
13_1_20cm_2_scaffold_290_22
unknown

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21173..21262
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_20cm_2_scaffold_290_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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21259..22683
DNA (1425bp) protein (475aa)
UPF0747 protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function UCP012535
13_1_20cm_2_scaffold_290_24
unknown

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22694..22957
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_290_25
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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22954..24519
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S9_GEMAT
integral membrane protein MviN; K03980 virulence factor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
hypothetical protein
13_1_20cm_2_scaffold_290_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24501..26261
DNA (1761bp) protein (587aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UvrABC system protein C
13_1_20cm_2_scaffold_290_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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26258..27478
DNA (1221bp) protein (407aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
threonine synthase
13_1_20cm_2_scaffold_290_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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27435..28625
DNA (1191bp) protein (397aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA alias=16ft_combo_ws3_scaffold_1020_42 id=5223158 tax=16ft_combo_ws3 species=Moorella thermoacetica (strain ATCC 39073) genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
UPF0272 protein J421_3233 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
UPF0272 protein
13_1_20cm_2_scaffold_290_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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28628..30205
DNA (1578bp) protein (526aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_290_30
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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30208..30996
DNA (789bp) protein (263aa)
Putative endo-beta-1,3-glucanase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5F2_CALAS rbh
putative endo-beta-1,3-glucanase
Tax=BJP_IG2157_Anaerolineales_55_23
Displaying items 1-30 of 33 in total

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