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13_1_20cm_2_scaffold_291

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_291_1

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1..363
DNA (363bp) protein (121aa)
hypothetical protein n=2 Tax=cellular organisms RepID=UPI000369E84C
Uncharacterized protein {ECO:0000313|EMBL:KKL59902.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GTP cyclohydrolase IIA
13_1_20cm_2_scaffold_291_2

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360..1547
DNA (1188bp) protein (396aa)
5-methylthioadenosine-S-adenosylhomocysteine deaminase protein {ECO:0000313|EMBL:KFM14838.1}; EC=3.5.4.1 {ECO:0000313|EMBL:KFM14838.1};; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Th
Amidohydrolase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBD6_9ARCH rbh
amidohydrolase
13_1_20cm_2_scaffold_291_3

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1534..2184
DNA (651bp) protein (217aa)
Diaminohydroxyphosphoribosylaminopyrimidine reductase (EC:1.1.1.-)
Deaminase-reductase domain-containing protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEQ6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL41277.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_291_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(2181..2690)
DNA (510bp) protein (170aa)
Transcription factor E n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQW9_9ARCH
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
tfe; Transcription factor E
13_1_20cm_2_scaffold_291_5

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comp(2718..3248)
DNA (531bp) protein (177aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=2 Tax=environmental samples RepID=B3T7T6_9ARCH
hypothetical protein
13_1_20cm_2_scaffold_291_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3238..4380)
DNA (1143bp) protein (381aa)
GTP1/OBG protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR25_9ARCH rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thauma
GTP1/OBG protein
13_1_20cm_2_scaffold_291_7
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4392..5435)
DNA (1044bp) protein (348aa)
Phosphate uptake regulator PhoU n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5X7_9ARCH rbh
Phosphate uptake regulator PhoU {ECO:0000313|EMBL:AFS81598.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus
phosphate uptake regulator PhoU
13_1_20cm_2_scaffold_291_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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5707..5997
DNA (291bp) protein (97aa)
PUA domain-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLI0_9ARCH
PUA domain-containing protein {ECO:0000313|EMBL:EGG41744.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitros
PUA domain-containing protein
13_1_20cm_2_scaffold_291_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6016..6354
DNA (339bp) protein (113aa)
Nascent polypeptide-associated complex protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BAX6_9ARCH
ubiquitin-associated domain-containing protein; K03626 nascent polypeptide-associated complex subunit alpha Tax=CSP1_1_Thaumarchaeota
nac; Nascent polypeptide-associated complex protein
13_1_20cm_2_scaffold_291_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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6456..7070
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUA2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06401.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_20cm_2_scaffold_291_11

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7312..7548
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBC7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM00653.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_291_12

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7566..7901
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA79_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07766.1}; TaxID=1456101 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_24_H04.;"
hypothetical protein
13_1_20cm_2_scaffold_291_13

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7901..9235
DNA (1335bp) protein (445aa)
ubiD; UbiD family decarboxylase (EC:4.1.1.-)
UbiD family decarboxylase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV19_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM00655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_291_14
uncultured marine crenarchaeote HF4000_APKG8D6, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9243..10148)
DNA (906bp) protein (302aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA87_9ARCH rbh
13_1_20cm_2_scaffold_291_15
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10202..10660)
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYR1_9ARCH
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGP94455.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candida
putative HTH-type transcriptional regulator LrpA
13_1_20cm_2_scaffold_291_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10733..11809)
DNA (1077bp) protein (359aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR02_9ARCH
aspartate-semialdehyde dehydrogenase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_291_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11895..12971
DNA (1077bp) protein (359aa)
Putative aminotransferase class I and II n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA90_9ARCH rbh
class I/II aminotransferase Tax=CSP1_1_Thaumarchaeota
class I/II aminotransferase
13_1_20cm_2_scaffold_291_18

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12968..13813
DNA (846bp) protein (282aa)
Probable cobyric acid synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5V7_9ARCH rbh
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote S
cobyrinic acid ac-diamide synthase
13_1_20cm_2_scaffold_291_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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13810..14802
DNA (993bp) protein (331aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ET38_9ARCH
cobalamin biosynthesis protein CobD Tax=CSP1_1_Thaumarchaeota
cobD; putative cobalamin biosynthesis protein CobD
13_1_20cm_2_scaffold_291_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14795..15520
DNA (726bp) protein (242aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=CSP1_1_Thaumarchaeota
cobS; adenosylcobinamide-GDP ribazoletransferase (EC:2.7.8.26)
Cobalamin synthase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLG1_9ARCH
13_1_20cm_2_scaffold_291_21

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15532..16101
DNA (570bp) protein (190aa)
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase (IspD) {ECO:0000313|EMBL:AIF07780.1}; EC=2.7.7.60 {ECO:0000313|EMBL:AIF07780.1};; TaxID=1456101 species="Archaea; Thaumarchaeota; environment
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3J11 RepID=B3T7V6_9ARCH
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase
13_1_20cm_2_scaffold_291_22
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16084..16281)
DNA (198bp) protein (66aa)
30S ribosomal protein S27e n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARM2_9ARCH
30S ribosomal protein S27E Tax=CSP1_1_Thaumarchaeota
30S ribosomal protein S27E
13_1_20cm_2_scaffold_291_23
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(16281..16559)
DNA (279bp) protein (93aa)
50S ribosomal protein L44E n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR66_9ARCH
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
ribosomal protein L44E
13_1_20cm_2_scaffold_291_24
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16627..18399
DNA (1773bp) protein (591aa)
ade; Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG3J11 RepID=B3T7V8_9ARCH rbh
adenine deaminase Tax=CSP1_1_Thaumarchaeota
13_1_20cm_2_scaffold_291_25
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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18531..20003
DNA (1473bp) protein (491aa)
Thermosome n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8V4_9ARCH
Thermosome {ECO:0000313|EMBL:AFS81572.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
thermosome
13_1_20cm_2_scaffold_291_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20012..21034
DNA (1023bp) protein (341aa)
PfkB family carbohydrate kinase {ECO:0000313|EMBL:AFU59937.1}; EC=2.7.1.- {ECO:0000313|EMBL:AFU59937.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososph
pfkB family carbohydrate kinase (EC:2.7.1.-)
PfkB family carbohydrate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM29_NITGG
13_1_20cm_2_scaffold_291_27
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21104..22534
DNA (1431bp) protein (477aa)
M36 family peptidase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U9T7_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFA94197.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
M36 family peptidase
13_1_20cm_2_scaffold_291_28
unknown

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comp(22904..23122)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_2_scaffold_291_29
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(23204..24727)
DNA (1524bp) protein (508aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO
guaA; GMP synthetase (glutamine aminotransferase) (EC:6.3.5.2)
GMP synthase (Glutamine-hydrolyzing) (Glutamine amidotransferase) (GMP synthetase) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQS5_9ARCH rbh
13_1_20cm_2_scaffold_291_30
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(24732..25289)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI00035EB40A
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
Displaying items 1-30 of 34 in total

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