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13_1_20cm_2_scaffold_3012

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3012_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..222
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037FE601
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_20cm_2_scaffold_3012_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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244..471
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037CDA8B
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_3012_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

852..1481
DNA (630bp) protein (210aa)
alpha/beta hydrolase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3CD6A
alpha/beta hydrolase fold protein; K07019 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_3012_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1478..3001
DNA (1524bp) protein (508aa)
ushA; 5'-nucleotidase (EC:3.1.3.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5'-nucleotidase n=1 Tax=uncultured prokaryote RepID=H5SKN9_9ZZZZ
putative 5'-nucleotidase
13_1_20cm_2_scaffold_3012_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3125..3613
DNA (489bp) protein (163aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0J7_DESTA
two component transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_20cm_2_scaffold_3012_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3653..4597)
DNA (945bp) protein (315aa)
oppC; peptide ABC transporter membrane protein (EC:3.6.3.24)
peptide ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI00036E0672
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_3012_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4623..5582)
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_3012_8
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5644..7440)
DNA (1797bp) protein (599aa)
peptide ABC transporter substrate-binding protein (EC:3.6.3.24)
Peptide ABC transporter substrate-binding protein n=1 Tax=Oceanibaculum indicum P24 IPR2_9PROT">RepID=K2IPR2_9PROT
peptide ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
13_1_20cm_2_scaffold_3012_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7600..8259
DNA (660bp) protein (220aa)
Thiol-disulfide oxidoreductase resA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG71_9BACT
resA; thiol-disulfide oxidoreductase ResA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
resA; thiol-disulfide oxidoreductase resA
13_1_20cm_2_scaffold_3012_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8256..8879
DNA (624bp) protein (208aa)
Cytochrome c biogenesis protein CcdA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHJ8_9BACT
ccdA; cytochrome c biogenesis protein CcdA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ccdA; cytochrome c biogenesis protein CcdA
13_1_20cm_2_scaffold_3012_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8834..8929
DNA (96bp) protein (32aa)
ccdA; cytochrome c biogenesis protein CcdA Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_3012_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8934..9833
DNA (900bp) protein (300aa)
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homoserine kinase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUS7_KYRT2
homoserine kinase
13_1_20cm_2_scaffold_3012_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9892..11031
DNA (1140bp) protein (380aa)
Major facilitator superfamily MFS_1 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLP8_9PROT
Major facilitator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Major facilitator
13_1_20cm_2_scaffold_3012_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11043..12176
DNA (1134bp) protein (378aa)
dcd; 2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dcd; 2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13)
2'-deoxycytidine 5'-triphosphate deaminase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ22_9BACT
13_1_20cm_2_scaffold_3012_15
unknown

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comp(12423..12617)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_2_scaffold_3012_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12638..13546
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036D169A
LysR family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
LysR family transcriptional regulator
13_1_20cm_2_scaffold_3012_17
unknown

Not on your lists

13654..13743
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 17 items

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