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13_1_20cm_2_scaffold_314

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_314_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..527)
DNA (525bp) protein (175aa)
PASTA-related domain protein n=2 Tax=Geobacter metallireducens RepID=Q39WE1_GEOMG
PASTA-related domain protein {ECO:0000313|EMBL:ABB31433.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter meta
PASTA-related domain-containing protein
13_1_20cm_2_scaffold_314_2
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(663..1094)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6R703_NOCCG
Uncharacterized protein {ECO:0000313|EMBL:CCF64722.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
hypothetical protein
13_1_20cm_2_scaffold_314_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1430..2242)
DNA (813bp) protein (271aa)
Putative arylesterase, non-heme chloride peroxidase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAI0_HALJB
Putative arylesterase, non-heme chloride peroxidase {ECO:0000313|EMBL:ADJ14702.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" sou
putative arylesterase, non-heme chloride peroxidase
13_1_20cm_2_scaffold_314_4
unknown

Not on your lists

comp(2245..2382)
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_2_scaffold_314_5
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2464..3249)
DNA (786bp) protein (262aa)
Acetoin reductase family protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8GDU1_9PSEU
Acetoin reductase family protein {ECO:0000313|EMBL:EHY88885.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora az
acetoin reductase family protein
13_1_20cm_2_scaffold_314_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3268..3657)
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1H8M5_9PSEU
Endoribonuclease L-PSP {ECO:0000313|EMBL:EOD59975.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM
endoribonuclease L-PSP
13_1_20cm_2_scaffold_314_7
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3677..5086)
DNA (1410bp) protein (470aa)
Amidase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EQX7_9NOCA
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A {ECO:0000313|EMBL:GAJ79348.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia
amidase
13_1_20cm_2_scaffold_314_8
unknown

Not on your lists

comp(5083..5262)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_2_scaffold_314_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5259..6068)
DNA (810bp) protein (270aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=RBG_16_RIF_CHLX_72_14_curated
Creatininase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LMC5_HALLT
creatininase
13_1_20cm_2_scaffold_314_10
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(6107..7093)
DNA (987bp) protein (329aa)
inner-membrane translocator n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627F22
sugar ABC transporter permease; K10440 ribose transport system permease protein Tax=RBG_16_Chloroflexi_54_18_curated
ribose ABC transport system
13_1_20cm_2_scaffold_314_11
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7090..8643)
DNA (1554bp) protein (518aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637, ECO:0000313|EMBL:CCW34923.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthono
ABC-type sugar transport system, ATPase component (EC:3.6.3.17)
ABC-type sugar transport system, ATPase component n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETT9_9BACT
13_1_20cm_2_scaffold_314_12
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(8661..9719)
DNA (1059bp) protein (353aa)
ABC transporter substrate-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627F23
Extracellular ligand-binding receptor Tax=RBG_16_Chloroflexi_57_11_curated
ABC-type sugar transport system, periplasmic component
13_1_20cm_2_scaffold_314_13

Not on your lists

comp(9743..10837)
DNA (1095bp) protein (365aa)
Multiple sugar transport system permease protein n=1 Tax=uncultured prokaryote RepID=H5SKT5_9ZZZZ
Multiple sugar transport system permease protein {ECO:0000313|EMBL:BAL56771.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
inner-membrane translocator
13_1_20cm_2_scaffold_314_14
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10834..11688)
DNA (855bp) protein (285aa)
Transcriptional regulator n=1 Tax=Brevibacillus sp. CF112 RepID=J2IG83_9BACL
Transcriptional regulator {ECO:0000313|EMBL:EJL47683.1}; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
IclR family transcriptional regulator
13_1_20cm_2_scaffold_314_15
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11694..12044)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RDH7_9ACTO
Putative ethyl tert-butyl ether degradation protein EthD {ECO:0000313|EMBL:AFA75181.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia p
ethD; putative ethyl tert-butyl ether degradation protein EthD
13_1_20cm_2_scaffold_314_16
unknown

Not on your lists

12245..12358
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_2_scaffold_314_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12402..14912)
DNA (2511bp) protein (837aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y774_NITMU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48526.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
hypothetical protein
13_1_20cm_2_scaffold_314_18
unknown

Not on your lists

comp(15249..15695)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_2_scaffold_314_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15730..16371)
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=D8EDY8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFK43666.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
hypothetical protein
13_1_20cm_2_scaffold_314_20
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16757..17653)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LDV1_THEPS
hypothetical protein Tax=GWA2_Rhodocyclales_65_20_curated
hypothetical protein
Displaying 20 items

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