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13_1_20cm_2_scaffold_318

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_318_1

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2..283
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2DZR1_9ARCH
Marine sediment metagenome DNA, contig: S01H1_L00574 {ECO:0000313|EMBL:GAF84883.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Ser/Thr protein kinase
13_1_20cm_2_scaffold_318_2
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

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comp(280..1134)
DNA (855bp) protein (285aa)
ABC transporter permease protein n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ER87_9CREN
ABC transporter permease protein {ECO:0000313|EMBL:BAE95239.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosoca
ABC transporter permease
13_1_20cm_2_scaffold_318_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1125..1961)
DNA (837bp) protein (279aa)
ABC transporter n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=Q4LED5_9ARCH
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC-2 type transport system protein
13_1_20cm_2_scaffold_318_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1961..2938)
DNA (978bp) protein (326aa)
Antibiotic transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX0_9BACT
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_318_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3019..5880)
DNA (2862bp) protein (954aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon RepID=Q6MZB0_9ARCH rbh
DEAD/DEAH box helicase
13_1_20cm_2_scaffold_318_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6044..6367
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036E8F22
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-binding protein
13_1_20cm_2_scaffold_318_7
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

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6383..7123
DNA (741bp) protein (247aa)
Signal peptidase SipW n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D902_BACAZ
peptidase S26
putative lipoprotein Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
13_1_20cm_2_scaffold_318_8
unknown

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7213..7917
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_20cm_2_scaffold_318_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8083..9252
DNA (1170bp) protein (390aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_20cm_2_scaffold_318_10
unknown

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9772..9879
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_20cm_2_scaffold_318_11
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(9905..10546)
DNA (642bp) protein (214aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=582419 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIQ2_PYRYC
ribonuclease HII
13_1_20cm_2_scaffold_318_12
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10575..11111)
DNA (537bp) protein (179aa)
Nucleoside-triphosphatase MSSIT_2528 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phospho
Nucleoside-triphosphatase THEP1 n=2 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=NTPTH_METAC
putative NTPase
13_1_20cm_2_scaffold_318_13
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(11108..11749)
DNA (642bp) protein (214aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000255|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000255|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RLME_METTH
cell division protein J
13_1_20cm_2_scaffold_318_14
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(11765..12106)
DNA (342bp) protein (114aa)
hypothetical protein (EC:6.1.1.10); K06878 tRNA-binding protein Tax=RBG_16_Bathyarchaeota_57_9_curated
Methionine--tRNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5Y7_THEAS
methionyl-tRNA synthetase
13_1_20cm_2_scaffold_318_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(12147..13418)
DNA (1272bp) protein (424aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P0_SPHTD
peptidase M16 domain-containing protein
13_1_20cm_2_scaffold_318_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(13408..14721)
DNA (1314bp) protein (438aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVK0_ROSS1
peptidase M16 domain-containing protein
13_1_20cm_2_scaffold_318_17
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

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comp(14754..15356)
DNA (603bp) protein (201aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_1_20cm_2_scaffold_318_18
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

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15457..16668
DNA (1212bp) protein (404aa)
DUF2088 domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU8_9CREN
DUF2088 domain protein {ECO:0000313|EMBL:ADP09473.1}; TaxID=907718 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote
Transcriptional regulator
13_1_20cm_2_scaffold_318_19
RBG_16_Archaea_50_20_curated, Archaea

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16798..18705
DNA (1908bp) protein (636aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_318_20
RBG_16_Archaea_50_20_curated, Archaea

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comp(18768..19550)
DNA (783bp) protein (261aa)
F420-dependent oxidoreductase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L553_KORCO
F420-dependent oxidoreductase Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase
13_1_20cm_2_scaffold_318_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(19547..21103)
DNA (1557bp) protein (519aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ38_PETMO
13_1_20cm_2_scaffold_318_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(21157..22848)
DNA (1692bp) protein (564aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
13_1_20cm_2_scaffold_318_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(22845..23987)
DNA (1143bp) protein (381aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7) Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003721FA4
imidazolonepropionase
13_1_20cm_2_scaffold_318_24
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(24139..25230)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNS5_THES4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_2_scaffold_318_25
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(25460..26512)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Bacillus sp. 95MFCvi2.1 RepID=UPI00037B5A3D
SagB-type dehydrogenase domain-containing protein {ECO:0000313|EMBL:EOP59350.1}; TaxID=1053234 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" sourc
SagB-type dehydrogenase domain protein
Displaying 25 items

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