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13_1_20cm_2_scaffold_3295

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3295_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..816
DNA (816bp) protein (272aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A491_GEMAT
13_1_20cm_2_scaffold_3295_2
unknown

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791..1177
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_2_scaffold_3295_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1174..1482
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A489_GEMAT
hypothetical protein; K09888 cell division protein ZapA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF710
13_1_20cm_2_scaffold_3295_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1543..3057
DNA (1515bp) protein (505aa)
Ribonuclease Y n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A488_GEMAT
hypothetical protein; K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3295_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3089..3937
DNA (849bp) protein (283aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:3.5.4.9 1.5.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Bifunctional protein FolD n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R3B2_SPISS
Bifunctional protein folD
13_1_20cm_2_scaffold_3295_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3919..5079
DNA (1161bp) protein (387aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Exodeoxyribonuclease 7 large subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A486_GEMAT
Exodeoxyribonuclease 7 large subunit
13_1_20cm_2_scaffold_3295_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5076..5291
DNA (216bp) protein (72aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Exodeoxyribonuclease 7 small subunit n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VDH4_9DELT
exodeoxyribonuclease VII, small subunit
13_1_20cm_2_scaffold_3295_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5272..6186
DNA (915bp) protein (305aa)
geranyltranstransferase (EC:2.5.1.10); K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Geranyltranstransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A484_GEMAT
Polyprenyl synthetase
13_1_20cm_2_scaffold_3295_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6307..8214
DNA (1908bp) protein (636aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A483_GEMAT
1-deoxy-D-xylulose-5-phosphate synthase
13_1_20cm_2_scaffold_3295_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8211..9083
DNA (873bp) protein (291aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PPNK_GEMAT
inorganic polyphosphate/ATP-NAD kinase
13_1_20cm_2_scaffold_3295_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9083..10798
DNA (1716bp) protein (572aa)
DNA repair protein RecN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A481_GEMAT
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein RecN
13_1_20cm_2_scaffold_3295_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10722..12323)
DNA (1602bp) protein (534aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_3295_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(12398..13612)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCT1_RHOM4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACY47041.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
hypothetical protein
13_1_20cm_2_scaffold_3295_14
unknown

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comp(13631..13786)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_2_scaffold_3295_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(13783..15069)
DNA (1287bp) protein (429aa)
long-chain fatty acid transporter n=1 Tax=Salisaeta longa RepID=UPI0003B60388
Long-chain fatty acid transport protein, putative {ECO:0000313|EMBL:ABC45815.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
long-chain fatty acid transport protein
13_1_20cm_2_scaffold_3295_16
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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15113..16198
DNA (1086bp) protein (362aa)
Galactokinase {ECO:0000313|EMBL:AEB12881.1}; EC=2.7.1.6 {ECO:0000313|EMBL:AEB12881.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source=
galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPV5_MARHT
13_1_20cm_2_scaffold_3295_trna_1
unknown

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16211..16296
DNA (86bp)
transferRNA
Displaying 17 items

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