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13_1_20cm_2_scaffold_330

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_330_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..1078
DNA (1077bp) protein (359aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] alias=RBG9_56_23,RBG9_C00056G00023 id=1246557 tax=RBG9 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_1_20cm_2_scaffold_330_2
unknown

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comp(1079..1282)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_330_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1308..1961)
DNA (654bp) protein (218aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_330_4
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1958..2593)
DNA (636bp) protein (212aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LU03_DESBD
Glycoside hydrolase family 13 domain protein {ECO:0000313|EMBL:ACU89626.1}; Flags: Precursor;; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiac
glycoside hydrolase family 13
13_1_20cm_2_scaffold_330_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2590..3135)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_330_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(3164..4666)
DNA (1503bp) protein (501aa)
Protein containing DUF255 (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BWE8_9ZZZZ
hypothetical protein; K06888 Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_20cm_2_scaffold_330_7
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4717..4944
DNA (228bp) protein (76aa)
Iron-binding zinc finger protein, CDGSH type n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BEH4_SANKS
Iron-binding zinc finger protein, CDGSH type {ECO:0000313|EMBL:ACZ21252.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddi
iron-binding zinc finger protein, CDGSH type
13_1_20cm_2_scaffold_330_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5029..5205
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6K0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_2_scaffold_330_9
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(5239..5739)
DNA (501bp) protein (167aa)
lipoprotein Tax=RBG_16_Chloroflexi_64_32_curated
lipoprotein
13_1_20cm_2_scaffold_330_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5736..7367)
DNA (1632bp) protein (544aa)
NAD-dependent aldehyde dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8Q0_ANADF
delta-1-pyrroline-5-carboxylate dehydrogenase
13_1_20cm_2_scaffold_330_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7413..7883
DNA (471bp) protein (157aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase
13_1_20cm_2_scaffold_330_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7880..8920)
DNA (1041bp) protein (347aa)
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_330_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9097..9687
DNA (591bp) protein (197aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_330_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9688..11586
DNA (1899bp) protein (633aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
13_1_20cm_2_scaffold_330_15
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11664..12152
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q4C2_9RHIZ
conserved membrane protein of unknown function
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_20cm_2_scaffold_330_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12416..14026
DNA (1611bp) protein (537aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B7_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-binding region ATPase domain protein
13_1_20cm_2_scaffold_330_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14023..14745
DNA (723bp) protein (241aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B6_GEMAT
Response regulator receiver {ECO:0000313|EMBL:AHG87878.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
response regulator receiver
13_1_20cm_2_scaffold_330_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15560
DNA (768bp) protein (256aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=mine drainage metagenome RepID=T0ZPH6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETW99528.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_20cm_2_scaffold_330_19
Flexithrix dorotheae, Flexithrix, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15557..16312)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037B53F9
13_1_20cm_2_scaffold_330_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16414..16824
DNA (411bp) protein (137aa)
acT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ACT domain-containing protein alias=RBG1_889,RBG1_C00001G00889 id=1250447 tax=RBG1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown
ACT domain-containing protein
13_1_20cm_2_scaffold_330_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16863..17147
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_330_22
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17144..17497)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WJV9_CHLAA
Uncharacterized protein {ECO:0000313|EMBL:ABY36575.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
hypothetical protein
13_1_20cm_2_scaffold_330_23
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17500..18177)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YL32_BRASO
Uncharacterized protein {ECO:0000313|EMBL:CAL74608.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hydrolase exported protein
Displaying 23 items

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