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13_1_20cm_2_scaffold_3349

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3349_1
unknown

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_20cm_2_scaffold_3349_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(90..1991)
DNA (1902bp) protein (634aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A483_GEMAT
1-deoxy-D-xylulose-5-phosphate synthase
13_1_20cm_2_scaffold_3349_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1993..2850)
DNA (858bp) protein (286aa)
geranyltranstransferase (EC:2.5.1.10); K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Geranyltranstransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A484_GEMAT
Polyprenyl synthetase
13_1_20cm_2_scaffold_3349_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2891..3133)
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A485_GEMAT
13_1_20cm_2_scaffold_3349_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3133..4290)
DNA (1158bp) protein (386aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Exodeoxyribonuclease 7 large subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A486_GEMAT
Exodeoxyribonuclease 7 large subunit
13_1_20cm_2_scaffold_3349_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4275..5120)
DNA (846bp) protein (282aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:3.5.4.9 1.5.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036CDF9E
Bifunctional protein folD
13_1_20cm_2_scaffold_3349_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5152..6666)
DNA (1515bp) protein (505aa)
Ribonuclease Y n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A488_GEMAT
hypothetical protein; K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
2',3'-cyclic-nucleotide 2'-phosphodiesterase
13_1_20cm_2_scaffold_3349_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6735..7061)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A489_GEMAT
hypothetical protein; K09888 cell division protein ZapA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF710
13_1_20cm_2_scaffold_3349_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7058..9754)
DNA (2697bp) protein (899aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A491_GEMAT
Phenylalanyl-tRNA synthetase beta chain
13_1_20cm_2_scaffold_3349_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(9751..10779)
DNA (1029bp) protein (343aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SYFA_GEMAT
Phenylalanyl-tRNA synthetase alpha chain
13_1_20cm_2_scaffold_3349_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(11076..11270)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS24_KYRT2
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L35
13_1_20cm_2_scaffold_3349_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11280..11672)
DNA (393bp) protein (131aa)
Translation initiation factor IF-3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A495_GEMAT
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
infC; translation initiation factor IF-3
13_1_20cm_2_scaffold_3349_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11945..12808)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A496_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_20cm_2_scaffold_3349_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12805..13518)
DNA (714bp) protein (238aa)
dnaQ; DNA polymerase III epsilon subunit (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA polymerase III epsilon subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A497_GEMAT
DNA polymerase III, epsilon subunit
13_1_20cm_2_scaffold_3349_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13508..14740)
DNA (1233bp) protein (411aa)
arginine deiminase; K01478 arginine deiminase [EC:3.5.3.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00037C55B5
arginine deiminase
13_1_20cm_2_scaffold_3349_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14774..15025)
DNA (252bp) protein (84aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A498_GEMAT
redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor Tax=RBG_16_Gemmatimonadetes_66_8_curated
Redox-sensing transcriptional repressor rex
13_1_20cm_2_scaffold_3349_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(15352..16101)
DNA (750bp) protein (250aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A499_GEMAT
Ribosomal RNA small subunit methyltransferase A
13_1_20cm_2_scaffold_3349_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16098..17657)
DNA (1560bp) protein (520aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A0_GEMAT
putative phosphatase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein phosphatase 2C domain protein
13_1_20cm_2_scaffold_3349_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17633..18091)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D4988B
response regulator receiver protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative anti-sigma factor
13_1_20cm_2_scaffold_3349_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18095..18430)
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A2_GEMAT
putative anti sigma factor antagonist Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
anti-anti-sigma factor
13_1_20cm_2_scaffold_3349_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18427..19344)
DNA (918bp) protein (306aa)
pta; phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pta; phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A3_GEMAT
13_1_20cm_2_scaffold_3349_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19341..19832)
DNA (492bp) protein (164aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4A4_GEMAT
Displaying 22 items

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