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13_1_20cm_2_scaffold_348

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_348_1
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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3..296
DNA (294bp) protein (98aa)
dev:DhcVS_1445 hypothetical protein alias=RBG9_63_73,RBG9_C00063G00073 id=1247406 tax=RBG9 species=Dehalococcoides sp. VS genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
nitrogenase subunit NifH
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_20cm_2_scaffold_348_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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334..915
DNA (582bp) protein (194aa)
putative N-acetyltransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative N-acetyltransferase alias=RBG9_39_111,RBG9_C00039G00111 id=1245772 tax=RBG9 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
hypothetical protein
13_1_20cm_2_scaffold_348_3
unknown

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1684..2037
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_2_scaffold_348_4
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(2330..2812)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
hypothetical protein
13_1_20cm_2_scaffold_348_5
unknown

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comp(2986..3540)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_20cm_2_scaffold_348_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(3697..4017)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAC0_9FIRM
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-binding protein
13_1_20cm_2_scaffold_348_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4268..6937
DNA (2670bp) protein (890aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon GZfos24D9 RepID=Q64C96_9ARCH
DEAD/DEAH box helicase
13_1_20cm_2_scaffold_348_8
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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7025..8095
DNA (1071bp) protein (357aa)
Antibiotic transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX0_9BACT
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:BAL58487.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;
putative ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_348_9
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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8082..8903
DNA (822bp) protein (274aa)
ABC transporter n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=Q4LED5_9ARCH
ABC transporter {ECO:0000313|EMBL:BAE03288.1}; ABC-2 type transport system protein {ECO:0000313|EMBL:BAJ51581.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus
ABC-2 type transport system protein
13_1_20cm_2_scaffold_348_10
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

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8900..9745
DNA (846bp) protein (282aa)
ABC transporter permease protein n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ER87_9CREN
ABC transporter permease protein {ECO:0000313|EMBL:BAE95239.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosoca
ABC transporter permease
13_1_20cm_2_scaffold_348_11

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comp(9754..10524)
DNA (771bp) protein (257aa)
Ser/Thr protein kinase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BF72_9ARCH
Marine sediment metagenome DNA, contig: S01H1_L00574 {ECO:0000313|EMBL:GAF84883.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Ser/Thr protein kinase
13_1_20cm_2_scaffold_348_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(10503..11921)
DNA (1419bp) protein (473aa)
tRNA adenylyltransferase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=RBG_13_Bathyarchaeota_38_9_curated
CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1Q073_9EURY
13_1_20cm_2_scaffold_348_13
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(11972..12574)
DNA (603bp) protein (201aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=190192 species="Ar
2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVM2_METKA
LigT; 2'-5' RNA ligase
13_1_20cm_2_scaffold_348_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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12622..13179
DNA (558bp) protein (186aa)
UPF0200 protein PF1294 n=2 Tax=Pyrococcus furiosus RepID=Y1294_PYRFU
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_2_scaffold_348_15
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

13305..13589
DNA (285bp) protein (95aa)
UPF0201 protein VMUT_1750 n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QUW9_VULM7
UPF0201 protein Vdis_0900 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distrib
hypothetical protein
13_1_20cm_2_scaffold_348_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13615..14535)
DNA (921bp) protein (307aa)
Ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=uncultured archaeon RepID=D1JEG1_9ARCH
ribonuclease Z Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_20cm_2_scaffold_348_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14536..15606)
DNA (1071bp) protein (357aa)
methyltransferase-like protein; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Methyltransferase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GIT0_METTF
methyltransferase-like protein
13_1_20cm_2_scaffold_348_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15955..16284
DNA (330bp) protein (110aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000364BA4E
rpb4; RNA polymerase Rpb4
13_1_20cm_2_scaffold_348_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

16433..17017
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1Z8_FERPA
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_348_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


17022..17834
DNA (813bp) protein (271aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Thermococcus sp. AM4 RepID=G2M2H2_9EURY
16S rRNA methyltransferase
13_1_20cm_2_scaffold_348_21
unknown

Not on your lists

comp(18092..18631)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_20cm_2_scaffold_348_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18897..19778)
DNA (882bp) protein (294aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q9YD40_AERPE
13_1_20cm_2_scaffold_348_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19779..20918)
DNA (1140bp) protein (380aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Succinyl-CoA synthetase beta chain n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A048_FERFK
succinyl-CoA synthetase subunit beta
13_1_20cm_2_scaffold_348_24
unknown

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21058..21213
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 24 items

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