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13_1_20cm_2_scaffold_3517

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3517_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(89..412)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382787F
ycdJ; arylesterase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ycdJ; arylesterase
13_1_20cm_2_scaffold_3517_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(474..1058)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C24E3
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_3517_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1342..2052
DNA (711bp) protein (237aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_12_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_20cm_2_scaffold_3517_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2219..7498
DNA (5280bp) protein (1760aa)
peptidase S8 and S53 Tax=RBG_16_Euryarchaeota_67_27_curated
Peptidase S8 and S53 subtilisin kexin sedolisin alias=gwe2_scaffold_136_163 id=1798894 tax=TA06 species=Geobacter daltonii FRC-32 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria rbh
peptidase S8/S53 subtilisin kexin sedolisin
13_1_20cm_2_scaffold_3517_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(7502..7906)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A1694
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
formylmethanofuran dehydrogenase subunit E-like
13_1_20cm_2_scaffold_3517_6

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8306..10915
DNA (2610bp) protein (870aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E0E5B
Archaeal ATPase family protein {ECO:0000313|EMBL:AIF03715.1}; TaxID=1457922 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_169_C11.;
hypothetical protein
13_1_20cm_2_scaffold_3517_7
Callithrix jacchus, Callithrix, Primates, Mammalia, Chordata, Metazoa

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comp(10905..11267)
DNA (363bp) protein (121aa)
PREDICTED: myomesin-3 n=1 Tax=Callithrix jacchus RepID=UPI0001D370A7
Uncharacterized protein {ECO:0000313|Ensembl:ENSCJAP00000038849}; TaxID=9483 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates;
MYOM3; myomesin family, member 3
13_1_20cm_2_scaffold_3517_8
unknown

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11496..12608
DNA (1113bp) protein (371aa)

This feature has no annotations

13_1_20cm_2_scaffold_3517_9

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comp(12704..14665)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1QBJ1_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AGF93363.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
13_1_20cm_2_scaffold_3517_10

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comp(14666..16462)
DNA (1797bp) protein (599aa)
Type II secretion system protein E n=1 Tax=uncultured organism RepID=M1PW19_9ZZZZ
Type II secretion system protein E {ECO:0000313|EMBL:AGF93364.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Flagella-related protein FlaI
13_1_20cm_2_scaffold_3517_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(16459..17007)
DNA (549bp) protein (183aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_3517_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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17133..17582
DNA (450bp) protein (150aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_3517_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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17585..18109
DNA (525bp) protein (175aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_3517_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(18110..18454)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TDS0_DESML
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_2_scaffold_3517_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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18904..22617
DNA (3714bp) protein (1238aa)
DNA replication helicase protein MCM; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
mCM; minichromosome maintenance protein MCM (EC:3.6.4.12)
Minichromosome maintenance (MCM) protein n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SLX6_9EURY
13_1_20cm_2_scaffold_3517_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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22637..22930
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q979V0_THEVO
hypothetical protein; K09148 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_2_scaffold_3517_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(22935..23483)
DNA (549bp) protein (183aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_3517_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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23591..24295
DNA (705bp) protein (235aa)
NMD3 n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SGB0_9EURY
NMD protein affecting ribosome stability and mRNA decay Tax=RBG_16_Euryarchaeota_68_13_curated
Nmd3
13_1_20cm_2_scaffold_3517_19
CG_CP01_01, CG_CP01, Bacteria

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comp(24337..26481)
DNA (2145bp) protein (715aa)
1, 4-beta cellobiohydrolase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IFA4_9BACL
hypothetical protein Tax=CG_CP01_01
cel44c
13_1_20cm_2_scaffold_3517_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(26482..26664)
DNA (183bp) protein (61aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 20 items

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