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13_1_20cm_2_scaffold_3564

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3564_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..591
DNA (591bp) protein (197aa)
Inner-membrane translocator n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAX3_MEISD
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
inner-membrane translocator
13_1_20cm_2_scaffold_3564_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

592..1377
DNA (786bp) protein (262aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXI9_ROSS1
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter-like protein
13_1_20cm_2_scaffold_3564_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1370..2071
DNA (702bp) protein (234aa)
ABC transporter related protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF01_THET1
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter
13_1_20cm_2_scaffold_3564_4
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

2096..3016
DNA (921bp) protein (307aa)
Methyltransferase, FkbM family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCL5_SINAD
FkbM family methyltransferase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
FkbM family methyltransferase
13_1_20cm_2_scaffold_3564_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3013..4638)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60114.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_20cm_2_scaffold_3564_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4720..6372)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ76_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEF60114.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_20cm_2_scaffold_3564_7
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(6369..7067)
DNA (699bp) protein (233aa)
putative glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-G21 RepID=UPI0003752CE9
family 2 glycosyltransferase
13_1_20cm_2_scaffold_3564_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7067..7885)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVF5_9BACT
methyltransferase-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
methyltransferase-like protein
13_1_20cm_2_scaffold_3564_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7882..8973)
DNA (1092bp) protein (364aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB (EC:2.6.1.-); K13010 perosamine synthetase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB (EC:2.6.1.-)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZJ76_ROSLO rbh
13_1_20cm_2_scaffold_3564_10
unknown

Not on your lists

comp(8970..9179)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_3564_11
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9176..10582)
DNA (1407bp) protein (469aa)
glycosyl transferase family protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=GWA1_Bdellovibrionales_52_35_curated
Glycosyl transferase family 2 n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZW37_DESOH
glycosyl transferase family protein
13_1_20cm_2_scaffold_3564_12
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10591..11829)
DNA (1239bp) protein (413aa)
C-methyltransferase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXM9_DESFR
NDP-hexose 3-C-methyltransferase TylCIII Tax=RBG_16_Deltaproteobacteria_58_17_curated
putative S-adenosyl-dependent methyltransferase
13_1_20cm_2_scaffold_3564_13
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

12057..13703
DNA (1647bp) protein (549aa)
Glycosyl transferase, family 39 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPL0_9BACT
hypothetical protein Tax=RBG_13_OP3X_46_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3564_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13700..14155
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVQ1_PUSST
MaoC domain-containing protein dehydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_3564_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14256..14759
DNA (504bp) protein (168aa)
MOSC domain containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF3_THET1
MOSC domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
MOSC domain-containing protein
13_1_20cm_2_scaffold_3564_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14756..15934
DNA (1179bp) protein (393aa)
FAD dependent oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMP9_9EURY
glycine/D-amino acid oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sarcosine oxidase beta subunit
13_1_20cm_2_scaffold_3564_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15978..16457)
DNA (480bp) protein (160aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B40B6A
TRAP transporter solute receptor, TAXI family; K07080 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TRAP transporter solute receptor, TAXI family
Displaying 17 items

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