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13_1_20cm_2_scaffold_3589

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3589_trna_1
unknown

Not on your lists

comp(249..322)
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_3589_1
unknown

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comp(346..1020)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_20cm_2_scaffold_3589_2
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1084..1356)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00035EF7D9
Short chain dehydrogenase family protein {ECO:0000313|EMBL:AIO34376.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
short chain dehydrogenase family protein
13_1_20cm_2_scaffold_3589_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1457..3565
DNA (2109bp) protein (703aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M7_SOLUE
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:ABJ83042.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter
Fis family transcriptional regulator
13_1_20cm_2_scaffold_3589_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3807..4319
DNA (513bp) protein (171aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP82_KORVE
anti-sigma regulatory factor, serine/threonine protein kinase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_20cm_2_scaffold_3589_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

4298..4681
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_20cm_2_scaffold_3589_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4702..5430
DNA (729bp) protein (243aa)
RNA polymerase sigma factor n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7G4_ACIC5
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (st
ECF subfamily RNA polymerase sigma-70 factor
13_1_20cm_2_scaffold_3589_7
unknown

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5417..5614
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_2_scaffold_3589_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

5665..6276
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M6_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_20cm_2_scaffold_3589_9
unknown

Not on your lists

6399..6671
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_2_scaffold_3589_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6708..7904
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003794906
Secretion protein HlyD {ECO:0000313|EMBL:ABF43070.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
secretion protein HlyD
13_1_20cm_2_scaffold_3589_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7908..11039
DNA (3132bp) protein (1044aa)
Hydrophobe/amphiphile efflux-1 HAE1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ79_KORVE
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:ABF43071.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versa
hydrophobe/amphiphile efflux protein
13_1_20cm_2_scaffold_3589_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

11041..12438
DNA (1398bp) protein (466aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ78_KORVE
RND efflux system, outer membrane lipoprotein, NodT Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
RND efflux system, outer membrane lipoprotein, NodT
13_1_20cm_2_scaffold_3589_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12611..13999
DNA (1389bp) protein (463aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM6_KORVE
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG93079.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
13_1_20cm_2_scaffold_3589_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14231..15271
DNA (1041bp) protein (347aa)
Monooxygenase, luciferase family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F345_ACIC5 rbh
Monooxygenase, luciferase family {ECO:0000313|EMBL:ACO34277.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum
monooxygenase, luciferase family
13_1_20cm_2_scaffold_3589_15
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

15502..16752
DNA (1251bp) protein (417aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0H2_PARAV
Uncharacterized protein {ECO:0000313|EMBL:CCB86711.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
hypothetical protein
Displaying 16 items

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