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13_1_20cm_2_scaffold_367

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_367_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..229
DNA (228bp) protein (76aa)
Protein RecA n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QT60_9FIRM
recA; RecA protein; K03553 recombination protein RecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
recA; DNA recombinase RecA
13_1_20cm_2_scaffold_367_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

226..825
DNA (600bp) protein (200aa)
Regulatory protein RecX n=1 Tax=Turicella otitidis ATCC 51513 RepID=I7JVP2_9CORY
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_367_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


812..3358
DNA (2547bp) protein (849aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D2_GEMAT
Alanine-tRNA ligase, eukaryota/bacteria
13_1_20cm_2_scaffold_367_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3355..3630
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4D1_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_367_5
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

3627..4337
DNA (711bp) protein (237aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] Tax=CG_Micra_04
geranylgeranylglyceryl phosphate synthase, partial n=2 Tax=Marinimicrobia RepID=UPI0003B39D3F
phosphoglycerol geranylgeranyltransferase
13_1_20cm_2_scaffold_367_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4334..4912
DNA (579bp) protein (193aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoheptose isomerase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2X8_9PROT
Phosphoheptose isomerase
13_1_20cm_2_scaffold_367_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4909..5637
DNA (729bp) protein (243aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C9_GEMAT
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_367_8
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5642..6019
DNA (378bp) protein (126aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=CG_Delta_03
Holo-[acyl-carrier-protein] synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=ACPS_ANADE
holo-(acyl-carrier-protein) synthase
13_1_20cm_2_scaffold_367_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6025..7167
DNA (1143bp) protein (381aa)
tRNA nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C8_GEMAT
tRNA nucleotidyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polynucleotide adenylyltransferase region
13_1_20cm_2_scaffold_367_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7160..7879
DNA (720bp) protein (240aa)
Metal cation transporter, ZIP family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F383_ACIC5
metal cation transporter, ZIP family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
zinc/iron permease
13_1_20cm_2_scaffold_367_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7927..9207
DNA (1281bp) protein (427aa)
ATPase (EC:3.6.-.-); K07478 putative ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C6_GEMAT
MgsA AAA+ ATPase domain-containing protein
13_1_20cm_2_scaffold_367_12
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9211..10098)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IIS4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB61619.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
type 11 methyltransferase
13_1_20cm_2_scaffold_367_13
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10095..11102)
DNA (1008bp) protein (336aa)
D-glucuronyl C5-epimerase {ECO:0000313|EMBL:EMI16410.1}; EC=5.1.3.- {ECO:0000313|EMBL:EMI16410.1};; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae
D-glucuronyl C5-epimerase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RAL1_9PLAN
hypothetical protein
13_1_20cm_2_scaffold_367_14
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11099..12826)
DNA (1728bp) protein (576aa)
Carbamoyl transferase n=1 Tax=planctomycete KSU-1 RepID=I3IIS6_9PLAN
Carbamoyl transferase {ECO:0000313|EMBL:GAB61621.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
carbamoyl transferase, NodU family
13_1_20cm_2_scaffold_367_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12804..14435)
DNA (1632bp) protein (544aa)
AMP-dependent synthetase and ligase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82VG3_NITEU
Acyl--CoA ligase {ECO:0000313|EMBL:KGF82259.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fadD; AMP-dependent synthetase and ligase
13_1_20cm_2_scaffold_367_16
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14540..15538
DNA (999bp) protein (333aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1300915 species=
nadE; NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIQ6_ANASK
13_1_20cm_2_scaffold_367_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15538..17517
DNA (1980bp) protein (660aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ADB53724.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ADB53724.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacteral
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFD1_CONWI rbh
13_1_20cm_2_scaffold_367_18
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17536..17799
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UAU5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18563.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina
hypothetical protein
13_1_20cm_2_scaffold_367_19
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17804..18625
DNA (822bp) protein (274aa)
Methyltransferase, FkbM family n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KHU3_9ACTO
Methyltransferase, FkbM family {ECO:0000313|EMBL:EKX60157.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;
FkbM family methyltransferase
13_1_20cm_2_scaffold_367_20
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18661..19893)
DNA (1233bp) protein (411aa)
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_20cm_2_scaffold_367_21
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19896..20054)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN68_IGNAJ
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
hypothetical protein
13_1_20cm_2_scaffold_367_22
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20066..20410)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CHJ9_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_20cm_2_scaffold_367_23
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20383..22209)
DNA (1827bp) protein (609aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Putative carbamoyl transferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN70_IGNAJ
Carbamoyltransferase
13_1_20cm_2_scaffold_367_24
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22329..23405
DNA (1077bp) protein (359aa)
Methyltransferase type 11 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX88_9GAMM
Methyltransferase type 11 {ECO:0000313|EMBL:EIJ35981.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 52
hypothetical protein
13_1_20cm_2_scaffold_367_25
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23418..24506)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMR3_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AFE07539.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_1_20cm_2_scaffold_367_26
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24578..25378
DNA (801bp) protein (267aa)
Methyltransferase, FkbM family n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KHU3_9ACTO
Methyltransferase, FkbM family {ECO:0000313|EMBL:EKX60157.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;
FkbM family methyltransferase
13_1_20cm_2_scaffold_367_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25344..26360)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y539_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP38013.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_2_scaffold_367_28
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26357..27412)
DNA (1056bp) protein (352aa)
Polysaccharide deacetylase n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZBA5_9ALTE
Polysaccharide deacetylase {ECO:0000313|EMBL:EHR42219.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanell
polysaccharide deacetylase
13_1_20cm_2_scaffold_367_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27414..28508)
DNA (1095bp) protein (365aa)
Methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:AHG90004.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_2_scaffold_367_30
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(28486..29574)
DNA (1089bp) protein (363aa)
Glycosyl transferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIH5_TERRK
Glycosyl transferase {ECO:0000313|EMBL:AFL89043.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NR
glycosyl transferase family protein
Displaying items 1-30 of 40 in total

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