ggKbase home page

13_1_20cm_2_scaffold_375

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_375_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3..416)
DNA (414bp) protein (138aa)
MnbE n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA0_9BURK
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
TRAP dicarboxylate transporter subunit DctM
13_1_20cm_2_scaffold_375_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(392..1462)
DNA (1071bp) protein (357aa)
lcfB4; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3)
LcfB2: long-chain-fatty-acid--CoA ligase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHT7_DESTT
lcfB3; long-chain-fatty-acid--CoA ligase LcfB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_375_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1891..2670)
DNA (780bp) protein (260aa)
fabG9; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035E4AF1
Uncharacterized protein {ECO:0000313|EMBL:ETX00238.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_20cm_2_scaffold_375_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2760..3254
DNA (495bp) protein (165aa)
UPI0003CF656F related cluster n=1 Tax=unknown RepID=UPI0003CF656F
Uncharacterized protein {ECO:0000313|EMBL:ETW93865.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
taurine catabolism dioxygenase
13_1_20cm_2_scaffold_375_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3269..3688
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13PB1_BURXL
Uncharacterized protein {ECO:0000313|EMBL:ETW93557.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
taurine catabolism dioxygenase TauD, TfdA family protein
13_1_20cm_2_scaffold_375_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..5380)
DNA (1683bp) protein (561aa)
Amidohydrolase 3 n=2 Tax=Sphingomonas wittichii RepID=A5V830_SPHWW
amidohydrolase 3 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
amidohydrolase 3
13_1_20cm_2_scaffold_375_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5401..6510)
DNA (1110bp) protein (370aa)
Amidohydrolase n=1 Tax=Prochloron didemni P1-Palau RepID=G0XS52_PRODI
Uncharacterized protein {ECO:0000313|EMBL:ETX04634.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
barH; barh protein
13_1_20cm_2_scaffold_375_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6654..7730
DNA (1077bp) protein (359aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWD2_Deltaproteobacteria_55_8_curated
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase SerA n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V3S4_9CHRO
13_1_20cm_2_scaffold_375_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8484..10385
DNA (1902bp) protein (634aa)
DNA segregation ATPase FtsK n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W137_9GAMM
DNA segregation ATPase FtsK {ECO:0000313|EMBL:EIL93178.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
cell division protein FtsK
13_1_20cm_2_scaffold_375_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10461..11411)
DNA (951bp) protein (317aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
dth:DICTH_1037 oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein alias=scaffold_6_140,RBG2_C00006G00140 id=1242173 tax=RBG2 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi
oligopeptide/dipeptide ABC transporter ATPase
13_1_20cm_2_scaffold_375_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(11419..12405)
DNA (987bp) protein (329aa)
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Chloroflexi_51_36_curated
sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein alias=scaffold_6_141,RBG2_C00006G00141 id=1242174 tax=RBG2 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein
13_1_20cm_2_scaffold_375_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12402..13343)
DNA (942bp) protein (314aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08379.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
ABC transporter permease; K02034 peptide/nickel transport system permease protein alias=scaffold_6_142,RBG2_C00006G00142 id=1242175 tax=RBG2 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria
Oligopeptide transport system permease AppC
13_1_20cm_2_scaffold_375_13
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13330..14253)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NU06_AFIFE
h16_A2950; ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Chloroflexi_46_14_curated
dppB; dipeptide transport system permease DppB
13_1_20cm_2_scaffold_375_14
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(14260..15873)
DNA (1614bp) protein (538aa)
Extracellular solute-binding protein family 5 n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4Y2_OCEP5
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
family 5 extracellular solute-binding protein
13_1_20cm_2_scaffold_375_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16400..17626
DNA (1227bp) protein (409aa)
Possible streptogramin lyase, gluconolactonase family protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6Z1T3_9ALTE rbh
lyase -like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
lyase -like protein
13_1_20cm_2_scaffold_375_16
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17763..18275
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46YT3_CUPPJ
Uncharacterized protein {ECO:0000313|EMBL:AAZ61700.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatub
hypothetical protein
13_1_20cm_2_scaffold_375_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18384..18821
DNA (438bp) protein (146aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDQ6_9RHOB
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
nitrate/sulfonate/bicarbonate ABC transporter permease
13_1_20cm_2_scaffold_375_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18943..19872
DNA (930bp) protein (310aa)
Transporter, chromate ion transporter (CHR) family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JM15_SYNJB
Uncharacterized protein {ECO:0000313|EMBL:ETX06016.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
chromate transporter
Displaying 18 items

View Taxonomy