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13_1_20cm_2_scaffold_376

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_376_1
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

comp(869..1456)
DNA (588bp) protein (196aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crena
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=uncultured crenarchaeote RepID=H5SB74_9CREN
13_1_20cm_2_scaffold_376_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1470..2834)
DNA (1365bp) protein (455aa)
UbiD family decarboxylase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGQ0_AFIFE rbh
UbiD family decarboxylase {ECO:0000313|EMBL:EKS29677.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.
UbiD family decarboxylase
13_1_20cm_2_scaffold_376_3
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2904..3641)
DNA (738bp) protein (246aa)
amidohydrolase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F6D9
Uncharacterized protein {ECO:0000313|EMBL:EPD97070.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
amidohydrolase
13_1_20cm_2_scaffold_376_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3774..5333)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B66255
Limonene dehydrogenase CtmB {ECO:0000313|EMBL:CDM25289.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniell
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_376_5
CG_Delta_04, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5339..7021)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B7AE1D rbh
FAD dependent oxidoreductase Tax=CG_Delta_04
Beta-carotene ketolase
13_1_20cm_2_scaffold_376_6

Not on your lists

7280..8845
DNA (1566bp) protein (522aa)
Amino acid transporter n=1 Tax=mine drainage metagenome RepID=T0ZC99_9ZZZZ
Amino acid transporter {ECO:0000313|EMBL:EQD45626.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_376_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(8878..9435)
DNA (558bp) protein (186aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_376_8
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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9598..10446
DNA (849bp) protein (283aa)
carbon-monoxide dehydrogenase (acceptor); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Molybdopterin dehydrogenase, FAD-binding protein n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QTX7_VULM7
molybdopterin dehydrogenase, FAD-binding protein
13_1_20cm_2_scaffold_376_9
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10458..10922
DNA (465bp) protein (155aa)
CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_c
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B6_9CHLR
CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
13_1_20cm_2_scaffold_376_10
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10909..13281
DNA (2373bp) protein (791aa)
putative dehydrogenase (EC:1.17.1.4)
dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI0003138284 rbh
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
13_1_20cm_2_scaffold_376_11

Not on your lists

comp(13336..13962)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacillus sp. HYC-10 RepID=K2MEN1_9BACI
Marine sediment metagenome DNA, contig: S06H3_S07272 {ECO:0000313|EMBL:GAI27711.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
methyltransferase
13_1_20cm_2_scaffold_376_12
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13994..14902)
DNA (909bp) protein (303aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC36399.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
13_1_20cm_2_scaffold_376_13
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15027..15746)
DNA (720bp) protein (240aa)
short-chain dehydrogenase n=1 Tax=Pusillimonas noertemannii RepID=UPI0003193895
oxidoreductase Tax=RBG_16_Deltaproteobacteria_49_23_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_376_14
CG_Delta_04, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15903..16697)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B7AE1D
phytoene dehydrogenase-like oxidoreductase Tax=CG_Delta_04
Beta-carotene ketolase
13_1_20cm_2_scaffold_376_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16681..17526)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B7AE1D
Limonene dehydrogenase CtmA {ECO:0000313|EMBL:CDM25290.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniell
Beta-carotene ketolase
13_1_20cm_2_scaffold_376_16
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(17813..18694)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1Y2_9CREN
Uncharacterized protein {ECO:0000313|EMBL:EHP70253.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis
13_1_20cm_2_scaffold_376_17
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18794..19789
DNA (996bp) protein (332aa)
Ureidoglycolate lyase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KSF5_9BURK
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:ETY84170.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sour
fumarylacetoacetate (FAA) hydrolase
13_1_20cm_2_scaffold_376_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

19833..20801
DNA (969bp) protein (323aa)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=CSP1_3_Armatimonadetes
ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESK7_9BACT
13_1_20cm_2_scaffold_376_19

Not on your lists

20889..21944
DNA (1056bp) protein (352aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000372D546 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN50088.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_376_20
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(21956..22813)
DNA (858bp) protein (286aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9I0_9ARCH
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.
13_1_20cm_2_scaffold_376_21
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(23108..23431)
DNA (324bp) protein (108aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=426368 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanoc
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VIC4_METM7
Displaying 21 items

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