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13_1_20cm_2_scaffold_3763

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3763_1
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..178
DNA (177bp) protein (59aa)
Two-component system sensor histidine kinase DegS {ECO:0000313|EMBL:BAM48033.1}; EC=2.7.13.3 {ECO:0000313|EMBL:BAM48033.1};; TaxID=698758 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillacea
degS; two-component system sensor histidine kinase DegS (EC:2.7.13.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003674F40
13_1_20cm_2_scaffold_3763_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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175..816
DNA (642bp) protein (214aa)
Response regulator, LuxR family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI51_9BACT
Response regulator, LuxR family {ECO:0000313|EMBL:CBK42938.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
LuxR family response regulator
13_1_20cm_2_scaffold_3763_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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949..1179
DNA (231bp) protein (77aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_20cm_2_scaffold_3763_4
unknown

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1225..1380
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_2_scaffold_3763_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1872..2861
DNA (990bp) protein (330aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:CBK43917.1}; EC=1.7.2.1 {ECO:0000313|EMBL:CBK43917.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;"
nirK; copper-containing nitrite reductase (EC:1.7.2.1)
Copper-containing nitrite reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8T5_9BACT rbh
13_1_20cm_2_scaffold_3763_6
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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2894..5773
DNA (2880bp) protein (960aa)
Putative Cytochrome c oxidase, fused subunits I, II, and III (Modular protein) {ECO:0000313|EMBL:CCQ90255.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CCQ90255.1};; TaxID=1266370 species="Bacteria; Nitrospinae; N
Putative Cytochrome c oxidase, fused subunits I, II, and III (Modular protein) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YYC0_9BACT rbh
hypothetical protein
13_1_20cm_2_scaffold_3763_7
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5778..5939
DNA (162bp) protein (54aa)
Tax=GWA2_Gallionellales_59_43_curated
13_1_20cm_2_scaffold_3763_8
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

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6117..6779
DNA (663bp) protein (221aa)
sodA; superoxide dismutase, iron/manganese-containing protein; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=GWC2_Elusimicrobia_65_9_curated
Superoxide dismutase [Mn] n=1 Tax=uncultured bacterium RepID=K1YVH1_9BACT
manganese and iron superoxide dismutase
13_1_20cm_2_scaffold_3763_9
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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6911..7504
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HX25_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES52735.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;
hypothetical protein
13_1_20cm_2_scaffold_3763_10
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7657..7863
DNA (207bp) protein (69aa)
Zinc finger CDGSH-type domain protein n=1 Tax=Burkholderia sp. H160 RepID=B5WAH2_9BURK
Zinc finger CDGSH-type domain protein {ECO:0000313|EMBL:EEA04540.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
zinc finger CDGSH-type domain containing protein
13_1_20cm_2_scaffold_3763_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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8036..9019
DNA (984bp) protein (328aa)
glk; glucokinase (Glucose kinase) (EC:2.7.1.2) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glk; glucokinase (Glucose kinase) (EC:2.7.1.2)
Glucokinase (Glucose kinase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX7_9BACT
13_1_20cm_2_scaffold_3763_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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9039..9692
DNA (654bp) protein (218aa)
talC; transaldolase, putative fructose-6-phosphate aldolase (EC:2.2.1.2 4.1.2.-); K00616 transaldolase [EC:2.2.1.2] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
talC; transaldolase, putative fructose-6-phosphate aldolase (EC:2.2.1.2 4.1.2.-)
Probable transaldolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAK9_9BACT
13_1_20cm_2_scaffold_3763_13
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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9705..10427
DNA (723bp) protein (241aa)
Oxidoreductase FAD/NAD(P)-binding family protein n=2 Tax=Legionella longbeachae RepID=D1RJ81_LEGLO
Methane monooxygenase component C {ECO:0000313|EMBL:CDZ79459.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella m
oxidoreductase FAD/NAD(P)-binding
13_1_20cm_2_scaffold_3763_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10502..10927
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI36_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK42923.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_3763_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10998..11351
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PI37_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK42924.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
yeaO; hypothetical protein
13_1_20cm_2_scaffold_3763_16
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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11385..12407
DNA (1023bp) protein (341aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales;
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=planctomycete KSU-1 RepID=I3ILN6_9PLAN rbh
glyceraldehyde-3-phosphate dehydrogenase, type I
13_1_20cm_2_scaffold_3763_17
unknown

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comp(12344..12757)
DNA (414bp) protein (138aa)

This feature has no annotations

Displaying 17 items

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