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13_1_20cm_2_scaffold_402

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_402_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(171..3200)
DNA (3030bp) protein (1010aa)
Glycosyl hydrolase, BNR repeat n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E0_SOLUE
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:ABJ83636.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;"
BNR repeat-containing glycosyl hydrolase
13_1_20cm_2_scaffold_402_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3197..3934)
DNA (738bp) protein (246aa)
Conserved hypothetical signal peptide protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024E1_SOLUE
Conserved hypothetical signal peptide protein {ECO:0000313|EMBL:ABJ83635.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus
signal peptide protein
13_1_20cm_2_scaffold_402_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4024..4683
DNA (660bp) protein (220aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_1_20cm_2_scaffold_402_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4761..5303
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_402_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5300..5941
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_402_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5941..7611
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_402_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7608..8387
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI1_GEMAT
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PBS lyase HEAT domain protein repeat-containing protein
13_1_20cm_2_scaffold_402_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8400..9002
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFS5_9CHLR
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF218
13_1_20cm_2_scaffold_402_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9018..9557
DNA (540bp) protein (180aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative ADP-ribose pyrophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN1_GEMAT
NUDIX hydrolase
13_1_20cm_2_scaffold_402_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9768..10412
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_402_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10978..12042
DNA (1065bp) protein (355aa)
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7)
Putative DNA polymerase III delta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM8_GEMAT
13_1_20cm_2_scaffold_402_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12075..12905
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_402_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12902..15523
DNA (2622bp) protein (874aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA mismatch repair protein mutS
13_1_20cm_2_scaffold_402_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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15520..16107
DNA (588bp) protein (196aa)
TonB-like Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_20cm_2_scaffold_402_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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16091..17476
DNA (1386bp) protein (462aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_2_scaffold_402_16

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17476..18441
DNA (966bp) protein (322aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL0_GEMAT
13_1_20cm_2_scaffold_402_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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18476..19333
DNA (858bp) protein (286aa)
Peptidase, S54 family n=1 Tax=Prevotella multiformis DSM 16608 RepID=F0F461_9BACT
rhomboid family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S54, rhomboid domain protein
13_1_20cm_2_scaffold_402_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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19418..20368
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_402_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20365..20616
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_402_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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20628..21122
DNA (495bp) protein (165aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
hypothetical protein
13_1_20cm_2_scaffold_402_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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21106..21462
DNA (357bp) protein (119aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomira
Transcriptional coactivator/pterin dehydratase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA0_9BACT
transcriptional coactivator/pterin dehydratase
13_1_20cm_2_scaffold_402_22
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21459..22775
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036B1E33
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:ACK51328.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyl
para-aminobenzoate synthase subunit I
13_1_20cm_2_scaffold_402_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(22720..23709)
DNA (990bp) protein (330aa)
trmE; putative tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA modification GTPase MnmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP6_GEMAT
trmE; putative tRNA modification GTPase TrmE
13_1_20cm_2_scaffold_402_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(24032..25699)
DNA (1668bp) protein (556aa)
Membrane protein insertase YidC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP7_GEMAT
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane protein oxaA
13_1_20cm_2_scaffold_402_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(25699..25959)
DNA (261bp) protein (87aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UEP1_CYAP2
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_2_scaffold_402_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26588..27919
DNA (1332bp) protein (444aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G6_GEMAT
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chromosomal replication initiator protein dnaA
13_1_20cm_2_scaffold_402_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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28160..29272
DNA (1113bp) protein (371aa)
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
13_1_20cm_2_scaffold_402_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(29255..29815)
DNA (561bp) protein (187aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
penicillin-binding protein 1a n=1 Tax=Pantoea sp. SL1_M5 RepID=UPI0002553E09
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
13_1_20cm_2_scaffold_402_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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30027..31523
DNA (1497bp) protein (499aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
Protein kinase {ECO:0000313|EMBL:AHG88134.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein kinase
13_1_20cm_2_scaffold_402_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(31520..32317)
DNA (798bp) protein (266aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 34 in total

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