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13_1_20cm_2_scaffold_404

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_404_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..247
DNA (246bp) protein (82aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXP2_9BACT
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_20cm_2_scaffold_404_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

244..867
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M2_GEMAT
lolA; outer-membrane lipoprotein carrier protein precursor; K03634 outer membrane lipoprotein carrier protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lolA; outer-membrane lipoprotein carrier protein precursor
13_1_20cm_2_scaffold_404_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(809..1723)
DNA (915bp) protein (305aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQA9_ROSCS
NADP oxidoreductase coenzyme F420-dependent Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADP oxidoreductase coenzyme F420-dependent
13_1_20cm_2_scaffold_404_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1720..3348)
DNA (1629bp) protein (543aa)
ctpA; carboxyl-terminal processing protease precursor (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
13_1_20cm_2_scaffold_404_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3348..3983)
DNA (636bp) protein (212aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B8_SPHTD
13_1_20cm_2_scaffold_404_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3992..4345)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF964
13_1_20cm_2_scaffold_404_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4345..5124)
DNA (780bp) protein (260aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Release factor glutamine methyltransferase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6M5_FRAAD
protein-(glutamine-N5) methyltransferase, release factor-specific
13_1_20cm_2_scaffold_404_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5117..6175)
DNA (1059bp) protein (353aa)
Peptide chain release factor 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L6_GEMAT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
Peptide chain release factor 1
13_1_20cm_2_scaffold_404_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6180..6401)
DNA (222bp) protein (74aa)
50S ribosomal protein L31 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RL31_THIDA
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rpmE; 50S ribosomal protein L31
13_1_20cm_2_scaffold_404_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6521..7192
DNA (672bp) protein (224aa)
Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L5_GEMAT
Crp family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
cyclic nucleotide-binding protein
13_1_20cm_2_scaffold_404_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7259..8125
DNA (867bp) protein (289aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase superfamily metal-dependent hydrolase
13_1_20cm_2_scaffold_404_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8142..8843
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_404_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8902..10851
DNA (1950bp) protein (650aa)
GAF domain protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HK42_9LEPT
metal dependent phosphohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_404_14
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10856..11212)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCD2_MEISD
TauE-like permease, putative Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
13_1_20cm_2_scaffold_404_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11209..12726)
DNA (1518bp) protein (506aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD9_RUBXD
Hydantoinase B/oxoprolinase
13_1_20cm_2_scaffold_404_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12723..14684)
DNA (1962bp) protein (654aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hydantoinase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00035F868F
N-methylhydantoinase A/acetone carboxylase beta subunit
13_1_20cm_2_scaffold_404_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14681..17167)
DNA (2487bp) protein (829aa)
lnt-1; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
oxidoreductase domain protein
13_1_20cm_2_scaffold_404_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17164..17850)
DNA (687bp) protein (229aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_404_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17852..19129)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
13_1_20cm_2_scaffold_404_20
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19098..20384)
DNA (1287bp) protein (429aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde aminomutase HemL (EC:5.4.3.8)
Glutamate-1-semialdehyde aminomutase HemL n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V821_9CHRO
13_1_20cm_2_scaffold_404_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20381..21685)
DNA (1305bp) protein (435aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_1_20cm_2_scaffold_404_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21682..22185)
DNA (504bp) protein (168aa)
UPF0234 protein Cabther_A1309 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LES7_CHLTF alias=16ft_combo_ws3_scaffold_775_12 id=5225583 tax=16ft_combo_ws3 species=Chloracidobacterium thermophilum (strain B) genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
13_1_20cm_2_scaffold_404_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22213..23070)
DNA (858bp) protein (286aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_404_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(23102..23386)
DNA (285bp) protein (95aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K1_GEMAT
signal peptidase I
Displaying 24 items

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