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13_1_20cm_2_scaffold_4090

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4090_1
unknown

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_2_scaffold_4090_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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283..1146
DNA (864bp) protein (288aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
AraC family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
AraC family transcriptional regulator
13_1_20cm_2_scaffold_4090_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1188..2879)
DNA (1692bp) protein (564aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_2_scaffold_4090_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2876..3316)
DNA (441bp) protein (147aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Orotate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
Orotate phosphoribosyltransferase
13_1_20cm_2_scaffold_4090_5
unknown

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4081..4311
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_2_scaffold_4090_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4338..5702
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_4090_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5699..7948
DNA (2250bp) protein (750aa)
putative soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Probable soluble lytic murein transglycosylase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZR1_THERP
putative soluble lytic murein transglycosylase
13_1_20cm_2_scaffold_4090_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8063..8263
DNA (201bp) protein (67aa)
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88687.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock protein DNA-binding protein
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) alias=RBG1_465,RBG1_C00001G00465 id=1250023 tax=RBG1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
13_1_20cm_2_scaffold_4090_9
unknown

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comp(8504..9925)
DNA (1422bp) protein (474aa)

This feature has no annotations

13_1_20cm_2_scaffold_4090_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9969..11093
DNA (1125bp) protein (375aa)
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
DNA polymerase I
13_1_20cm_2_scaffold_4090_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11190..11567
DNA (378bp) protein (126aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
Putative pilin {ECO:0000313|EMBL:AHG88689.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative pilin
13_1_20cm_2_scaffold_4090_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11770..14040)
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
mmpL; hypothetical protein; K06994 putative drug exporter of the RND superfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_4090_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14131..14964
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M10A and M12B matrixin and adamalysin
13_1_20cm_2_scaffold_4090_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15114..16055
DNA (942bp) protein (314aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
atm:ANT_29620 hypothetical protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] alias=RBG9_7_83,RBG9_C00007G00083 id=1244623 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_1_20cm_2_scaffold_4090_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16046..17185
DNA (1140bp) protein (380aa)
Beta-lactamase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH34_RHOM4
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase
13_1_20cm_2_scaffold_4090_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17310..17546
DNA (237bp) protein (79aa)
putative thiol-disulfide oxidoreductase DCC Tax=GWA2_Rokubacteria_73_35_curated
putative thiol-disulfide oxidoreductase DCC
13_1_20cm_2_scaffold_4090_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17570..17878
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF59
13_1_20cm_2_scaffold_4090_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17875..19017)
DNA (1143bp) protein (381aa)
putative ribonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
13_1_20cm_2_scaffold_4090_19
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19183..20070
DNA (888bp) protein (296aa)
ACC deaminase/D-cysteine desulfhydrase family protein n=1 Tax=Burkholderia pseudomallei 406e RepID=A8EQ74_BURPE
Pyridoxal-phosphate dependent enzyme family protein {ECO:0000313|EMBL:KKB65765.1}; TaxID=1249470 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia;
pyridoxal-phosphate dependent enzyme family protein
13_1_20cm_2_scaffold_4090_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20067..20813
DNA (747bp) protein (249aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
alpha/beta hydrolase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CB4BC
3-oxoadipate enol-lactonase
13_1_20cm_2_scaffold_4090_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20815..21087)
DNA (273bp) protein (91aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin Tax=GWC2_Gemmatimonadetes_71_10_curated
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
13_1_20cm_2_scaffold_4090_22
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21256..21648
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00035D3021
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EKF25598.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
transcriptional regulator
13_1_20cm_2_scaffold_4090_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21641..22312
DNA (672bp) protein (224aa)
Cyclase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVR1_9CHLR
Cyclase {ECO:0000313|EMBL:GAN45762.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
cyclase
13_1_20cm_2_scaffold_4090_24
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(22323..23300)
DNA (978bp) protein (326aa)
Peptidase M28 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VJ69_9CYAN
peptidase M28 Tax=CSP1_5_NC10
peptidase M28
13_1_20cm_2_scaffold_4090_25

Not on your lists

23582..24172
DNA (591bp) protein (197aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLT9_TREBD
Uncharacterized protein {ECO:0000313|EMBL:KKO11194.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_4090_26

Not on your lists

24136..24420
DNA (285bp) protein (95aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
Histidinol dehydrogenase n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GEH2_ACACA
Uncharacterized protein {ECO:0000313|EMBL:KKO11194.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_4090_27

Not on your lists

24417..25388
DNA (972bp) protein (324aa)
Histidinol dehydrogenase (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6PX81_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKO11195.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
histidinol phosphate aminotransferase
Displaying 27 items

View Taxonomy