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13_1_20cm_2_scaffold_4131

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4131_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1..1365
DNA (1365bp) protein (455aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX60_9BACT
lolC; lipoprotein releasing system transmembrane protein LolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MacB-like periplasmic core domain protein
13_1_20cm_2_scaffold_4131_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1362..2063
DNA (702bp) protein (234aa)
lolD; lipoprotein releasing system ATP-binding protein LolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=uncultured bacterium W5-51b RepID=H9BX59_9BACT
ABC transporter related protein
13_1_20cm_2_scaffold_4131_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2063..2560
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX58_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_4131_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2966..3577
DNA (612bp) protein (204aa)
hypothetical protein; K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP:guanido phosphotransferase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX57_9BACT
hypothetical protein
13_1_20cm_2_scaffold_4131_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3591..6071
DNA (2481bp) protein (827aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R6_GEMAT
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase AAA-2 domain protein
13_1_20cm_2_scaffold_4131_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6068..8470
DNA (2403bp) protein (801aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane protein assembly complex, YaeT protein
13_1_20cm_2_scaffold_4131_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8527..9057
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E1_9BACT
outer membrane chaperone Skp (OmpH) family protein; K06142 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
outer membrane chaperone Skp (OmpH)
13_1_20cm_2_scaffold_4131_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9073..10134
DNA (1062bp) protein (354aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_20cm_2_scaffold_4131_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10585..11355
DNA (771bp) protein (257aa)
lpxC/fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-];
lpxC_fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
13_1_20cm_2_scaffold_4131_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11352..12119
DNA (768bp) protein (256aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
13_1_20cm_2_scaffold_4131_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12116..13093
DNA (978bp) protein (326aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oxidoreductase domain protein
13_1_20cm_2_scaffold_4131_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13090..14202
DNA (1113bp) protein (371aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_1_20cm_2_scaffold_4131_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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14199..14831
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4M9_9PROT alias=16ft_combo_ws3_scaffold_16_111 id=5224129 tax=16ft_combo_ws3 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_1_20cm_2_scaffold_4131_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14828..15841
DNA (1014bp) protein (338aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_1_20cm_2_scaffold_4131_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15848..17161
DNA (1314bp) protein (438aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSQ3_GRAMM
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_2_scaffold_4131_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17161..17451
DNA (291bp) protein (97aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S rRNA methyltransferase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00035C8734
hypothetical protein
Displaying 16 items

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