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13_1_20cm_2_scaffold_4133

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4133_trna_2
unknown

Not on your lists

comp(3..75)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_4133_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(121..705)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P886_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_4133_2
unknown

Not on your lists

comp(715..1170)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_4133_3
unknown

Not on your lists

1275..2075
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_20cm_2_scaffold_4133_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2974..3642
DNA (669bp) protein (223aa)
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cu
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q9C9_9DELT
13_1_20cm_2_scaffold_4133_5
unknown

Not on your lists

3698..4021
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_2_scaffold_4133_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4165..4608
DNA (444bp) protein (148aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB83_9BACT
hypothetical protein
13_1_20cm_2_scaffold_4133_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4650..5681)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Z8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK43630.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_4133_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5706..5984)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB75_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40484.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_4133_9
unknown

Not on your lists

comp(6382..6819)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_2_scaffold_4133_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6899..8419
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PS49_9DELT rbh
metal-dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
GAF domain-containing protein
13_1_20cm_2_scaffold_4133_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8430..9797)
DNA (1368bp) protein (456aa)
Major facilitator superfamily transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCF4_9BACT rbh
major facilitator superfamily transporter Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
major facilitator superfamily transporter
13_1_20cm_2_scaffold_4133_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9946..10818
DNA (873bp) protein (291aa)
Predicted aminopeptidase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR8_9BACT
aminopeptidase Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
aminopeptidase
13_1_20cm_2_scaffold_4133_13
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10820..11401)
DNA (582bp) protein (194aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PR16_MEIRD
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_1_20cm_2_scaffold_4133_trna_1
unknown

Not on your lists

comp(11766..11838)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_4133_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11915..12625)
DNA (711bp) protein (237aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8R7_9BACT
13_1_20cm_2_scaffold_4133_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


12695..12967
DNA (273bp) protein (91aa)
30S ribosomal protein S20 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8R8_9BACT
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rpsT; 30S ribosomal protein S20
13_1_20cm_2_scaffold_4133_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(12933..13910)
DNA (978bp) protein (326aa)
holA; putative DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
holA; putative DNA polymerase III subunit delta (EC:2.7.7.7)
Putative DNA polymerase III, delta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8R9_9BACT
13_1_20cm_2_scaffold_4133_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(13907..14398)
DNA (492bp) protein (164aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_20cm_2_scaffold_4133_18
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(14542..14892)
DNA (351bp) protein (117aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=344747 species="Bacteria; Plancto
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9W1_9PLAN
Displaying 20 items

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