ggKbase home page

13_1_20cm_2_scaffold_4157

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4157_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
UPI0003D1C685 related cluster n=1 Tax=unknown RepID=UPI0003D1C685
hypothetical protein; K09735 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_2_scaffold_4157_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(476..676)
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D5438
13_1_20cm_2_scaffold_4157_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


comp(673..1248)
DNA (576bp) protein (192aa)
DNA-directed RNA polymerase subunit E (EC:2.7.7.6) Tax=RBG_16_Euryarchaeota_68_13_curated
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=2 Tax=Methanomassiliicoccus RepID=U5Q1X5_9EURY
13_1_20cm_2_scaffold_4157_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

1493..2029
DNA (537bp) protein (179aa)
Tax=RBG_16_Chloroflexi_64_32_curated
13_1_20cm_2_scaffold_4157_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2087..2476)
DNA (390bp) protein (130aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RBG_16_Euryarchaeota_67_27_curated
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJG3_CHLTF
13_1_20cm_2_scaffold_4157_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2464..4173)
DNA (1710bp) protein (570aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RBG_16_Euryarchaeota_68_12_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036B9FB5
13_1_20cm_2_scaffold_4157_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4319..4762
DNA (444bp) protein (148aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_4157_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4759..5991)
DNA (1233bp) protein (411aa)
phosphonopyruvate decarboxylase-related protein (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EE975
13_1_20cm_2_scaffold_4157_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6095..6766)
DNA (672bp) protein (224aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PY47_METMA
hypothetical protein; K09134 hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4157_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6783..8969)
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BQ22_STRBB
hypothetical protein, unknown function Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_2_scaffold_4157_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9218..10360
DNA (1143bp) protein (381aa)
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Isovaleryl-CoA dehydrogenase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKL8_9BACT
13_1_20cm_2_scaffold_4157_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10442..11086
DNA (645bp) protein (215aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_4157_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11087..12556)
DNA (1470bp) protein (490aa)
Tetratricopeptide repeat protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HI89_ACIS0
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_16_Euryarchaeota_68_12_curated
tetratricopeptide repeat protein
13_1_20cm_2_scaffold_4157_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(12628..15123)
DNA (2496bp) protein (832aa)
Tetratricopeptide repeat family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VK79_9CYAN
hypothetical protein; K12600 superkiller protein 3 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4157_15
unknown

Not on your lists

comp(15472..15606)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_2_scaffold_4157_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15645..16406
DNA (762bp) protein (254aa)
Zn-dependent hydrolase of the beta-lactamase fold n=4 Tax=Bacillus RepID=S6FYL4_BACAM
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
beta-lactamase
13_1_20cm_2_scaffold_4157_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16482..18809
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E6352
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CARDB domain-containing protein
Displaying 17 items

View Taxonomy