ggKbase home page

13_1_20cm_2_scaffold_4331

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4331_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(73..1287)
DNA (1215bp) protein (405aa)
Sodium/calcium exchanger membrane region n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF48_THET1 alias=16ft_combo_ws3_scaffold_578_25 id=5225356 tax=16ft_combo_ws3 species=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sodium/calcium exchanger membrane region
13_1_20cm_2_scaffold_4331_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1320..2576
DNA (1257bp) protein (419aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G2_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_4331_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2582..3211
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_4331_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3240..5072)
DNA (1833bp) protein (611aa)
Long-chain acyl-CoA synthetase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH85_9BACT alias=16ft_combo_ws3_scaffold_775_52 id=5225623 tax=16ft_combo_ws3 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria
fadD; Long-chain acyl-CoA synthetase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
AMP-dependent synthetase and ligase
13_1_20cm_2_scaffold_4331_5
unknown

Not on your lists

comp(5069..5728)
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_20cm_2_scaffold_4331_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5755..6249)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_2 repeat-containing protein
13_1_20cm_2_scaffold_4331_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6299..6850
DNA (552bp) protein (184aa)
Purine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H0_GEMAT
purine phosphoribosyltransferase; K07101 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosyltransferase
13_1_20cm_2_scaffold_4331_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6847..8160
DNA (1314bp) protein (438aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K421_DEHLB
peptidase U62 modulator of DNA gyrase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase U62 modulator of DNA gyrase
13_1_20cm_2_scaffold_4331_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8157..9497
DNA (1341bp) protein (447aa)
Peptidase U62 modulator of DNA gyrase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K422_DEHLB
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase U62 modulator of DNA gyrase
13_1_20cm_2_scaffold_4331_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9494..9988)
DNA (495bp) protein (165aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_4331_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10002..12011)
DNA (2010bp) protein (670aa)
ligA; NAD(+)-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DNLJ_GEMAT
DNA ligase
13_1_20cm_2_scaffold_4331_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12008..12793)
DNA (786bp) protein (262aa)
Adenylate cyclase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RTC7_9DELT
sensor histidine kinase/response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_1_20cm_2_scaffold_4331_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12853..14163
DNA (1311bp) protein (437aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJB6_CHLTF
13_1_20cm_2_scaffold_4331_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14173..14961
DNA (789bp) protein (263aa)
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89578.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_2_scaffold_4331_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15002..15766)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_4331_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15773..17104
DNA (1332bp) protein (444aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:BAH37835.1}; EC=2.4.2.2 {ECO:0000313|EMBL:BAH37835.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H5_GEMAT
13_1_20cm_2_scaffold_4331_17
unknown

Not on your lists

comp(17101..17307)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_4331_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17307..18626)
DNA (1320bp) protein (440aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DNA gyrase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT
DNA gyrase B subunit
Displaying 18 items

View Taxonomy