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13_1_20cm_2_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_438_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..1055
DNA (1053bp) protein (351aa)
ABC phosphate uptake transporter, substrate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIL0_NITGG
ABC phosphate uptake transporter, substrate-binding protein {ECO:0000313|EMBL:AFU57922.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitro
pstS1; ABC phosphate uptake transporter, substrate-binding protein
13_1_20cm_2_scaffold_438_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1219..2226
DNA (1008bp) protein (336aa)
ABC phosphate uptake transporter, substrate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIL0_NITGG
ABC phosphate uptake transporter, substrate-binding protein {ECO:0000313|EMBL:AFU57922.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitro
pstS1; ABC phosphate uptake transporter, substrate-binding protein
13_1_20cm_2_scaffold_438_3
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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2223..3107
DNA (885bp) protein (295aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV89_9ARCH
Phosphate transport system permease protein PstA {ECO:0000313|EMBL:AJW71514.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatu
pstA; Phosphate transport system permease protein PstA
13_1_20cm_2_scaffold_438_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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3122..3826
DNA (705bp) protein (235aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RBG_16_Thaumarchaeota_49_8_curated
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27)
ABC phosphate uptake transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI6_NITGG
13_1_20cm_2_scaffold_438_5
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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3882..4442
DNA (561bp) protein (187aa)
Phosphate uptake regulator n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8A1_9ARCH
phosphate uptake regulator, PhoU Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate uptake regulator
13_1_20cm_2_scaffold_438_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4927..5901)
DNA (975bp) protein (325aa)
putative DNA methylase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
hypothetical protein rbh
DNA modification methylase-like protein alias=RBG9_65_67,RBG9_C00065G00067 id=1247695 tax=RBG9 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
13_1_20cm_2_scaffold_438_7
RBG_16_Archaea_50_20_curated, Archaea

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6110..9457
DNA (3348bp) protein (1116aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
Putative DNA-directed RNA polymerase subunit B n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARL3_9ARCH
13_1_20cm_2_scaffold_438_8
RBG_16_Archaea_50_20_curated, Archaea

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9460..13305
DNA (3846bp) protein (1282aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
13_1_20cm_2_scaffold_438_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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13336..13614
DNA (279bp) protein (93aa)
50S ribosomal protein L30e n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RTM2_METFO
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e Tax=RBG_16_Bathyarchaeota_48_13_curated
50S ribosomal protein L30e
13_1_20cm_2_scaffold_438_10
RBG_16_Archaea_50_20_curated, Archaea

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13614..14051
DNA (438bp) protein (146aa)
Probable transcription termination protein NusA n=3 Tax=Sulfolobus acidocaldarius RepID=NUSA_SULAC
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=RBG_16_Archaea_50_20_curated
transcription elongation factor NusA-like protein
13_1_20cm_2_scaffold_438_11
RBG_16_Archaea_50_20_curated, Archaea

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14553..14897
DNA (345bp) protein (115aa)
30S ribosomal protein S12 n=1 Tax=Bacteria RepID=UPI000367EF31
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S12
13_1_20cm_2_scaffold_438_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(15274..16479)
DNA (1206bp) protein (402aa)
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RBG_13_Bathyarchaeota_46_16b_curated
glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GCST_HALOH
13_1_20cm_2_scaffold_438_13
unknown

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16903..17241
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_14
RBG_16_Archaea_50_20_curated, Archaea

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17257..17697
DNA (441bp) protein (147aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_438_15
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(17743..18198)
DNA (456bp) protein (152aa)
kdpC; potassium translocating ATPase, subunit C (EC:3.6.3.12)
Potassium-transporting ATPase subunit C n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MTH0_9EURY
Potassium-transporting ATPase subunit C {ECO:0000313|EMBL:EQB64625.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatal
13_1_20cm_2_scaffold_438_16
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(18210..20357)
DNA (2148bp) protein (716aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARC1_FERAC
hypothetical protein
13_1_20cm_2_scaffold_438_17
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(20369..21904)
DNA (1536bp) protein (512aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase A chain n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LA52_9EURY
hypothetical protein
13_1_20cm_2_scaffold_438_18

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comp(22136..22450)
DNA (315bp) protein (105aa)
AsnC family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0ZKG2_9ZZZZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQD45133.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AsnC family transcriptional regulator
13_1_20cm_2_scaffold_438_19
unknown

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22624..23223
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_20
unknown

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23220..23630
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23627..23938
DNA (312bp) protein (104aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84414.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_20cm_2_scaffold_438_22
unknown

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24046..24180
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_23
RBG_16_Archaea_50_20_curated, Archaea

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24952..25926
DNA (975bp) protein (325aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Archaea_50_20_curated
Cystathionine beta-synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5Q2_SPHTD
cystathionine beta-synthase
13_1_20cm_2_scaffold_438_24
unknown

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25941..26141
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_25
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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26705..27847
DNA (1143bp) protein (381aa)
Cystathionine gamma-lyase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AE82_PYRYC
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEH24593.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain
cystathionine gamma-lyase
13_1_20cm_2_scaffold_438_26
unknown

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comp(28019..28276)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_27
unknown

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28383..28763
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_28
unknown

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comp(28760..29926)
DNA (1167bp) protein (389aa)

This feature has no annotations

13_1_20cm_2_scaffold_438_29
Thermoplasma acidophilum, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(29941..33597)
DNA (3657bp) protein (1219aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI00035D69AD
Hypothetical membrane protein {ECO:0000313|EMBL:BAF30825.1}; TaxID=2303 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma aci
cell surface protein
13_1_20cm_2_scaffold_438_30
unknown

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comp(34009..34221)
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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