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13_1_20cm_2_scaffold_439

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_439_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3..656
DNA (654bp) protein (218aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=ARGB_SYNAS
13_1_20cm_2_scaffold_439_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

668..1861
DNA (1194bp) protein (398aa)
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR0_9BACT
13_1_20cm_2_scaffold_439_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1864..2787
DNA (924bp) protein (308aa)
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR1_9BACT
13_1_20cm_2_scaffold_439_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2777..3985
DNA (1209bp) protein (403aa)
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS0_9BACT
13_1_20cm_2_scaffold_439_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4001..4738
DNA (738bp) protein (246aa)
2-phosphosulfolactate phosphatase (EC:3.1.3.71); K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=GWA2_Rokubacteria_73_35_curated
2-phosphosulfolactate phosphatase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL26_DESK7
2-phosphosulfolactate phosphatase
13_1_20cm_2_scaffold_439_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4776..5345
DNA (570bp) protein (190aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES6_9BACT
13_1_20cm_2_scaffold_439_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5342..5956
DNA (615bp) protein (205aa)
Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL35_DESK7
Glycerol-3-phosphate acyltransferase
13_1_20cm_2_scaffold_439_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5953..6942
DNA (990bp) protein (330aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWA2_Rokubacteria_73_35_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GPDA_KORVE
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
13_1_20cm_2_scaffold_439_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6947..7945
DNA (999bp) protein (333aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=GWA2_Rokubacteria_73_35_curated
Galactose-1-phosphate uridylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUV2_KORVE alias=16ft_combo_ws3_scaffold_136_56 id=5223567 tax=16ft_combo_ws3 species=Koribacter versatilis (strain Ellin345) genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria
galactose-1-phosphate uridylyltransferase
13_1_20cm_2_scaffold_439_trna_1
unknown

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7971..8042
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_439_trna_2
unknown

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8079..8151
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_439_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8251..8622
DNA (372bp) protein (124aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_439_trna_3
unknown

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8635..8717
DNA (83bp)
transferRNA
13_1_20cm_2_scaffold_439_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9344..10177
DNA (834bp) protein (278aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFQ3_9BACT
13_1_20cm_2_scaffold_439_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10210..11595
DNA (1386bp) protein (462aa)
RNA-splicing ligase RtcB n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFV6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_439_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11622..13325
DNA (1704bp) protein (568aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q748E2_GEOSL
radical SAM protein Tax=GWA2_Rokubacteria_73_35_curated
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
13_1_20cm_2_scaffold_439_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13325..14347
DNA (1023bp) protein (341aa)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK0_9BACT
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
moaA; molybdenum cofactor biosynthesis protein A
13_1_20cm_2_scaffold_439_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14431..15159
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFK6_SORC5
hypothetical protein; K09162 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_439_16
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15361..15816
DNA (456bp) protein (152aa)
Alkylhydroperoxidase AhpD core n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH94_MOOTA
Uncharacterized protein {ECO:0000313|EMBL:ETX01423.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
alkylhydroperoxidase AhpD core
13_1_20cm_2_scaffold_439_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15777..17222)
DNA (1446bp) protein (482aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM41_9BACT
13_1_20cm_2_scaffold_439_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17215..21798)
DNA (4584bp) protein (1528aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain (NADPH-GOGAT) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM42_9BACT rbh
13_1_20cm_2_scaffold_439_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

21908..22753
DNA (846bp) protein (282aa)
Transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJM1_SINAD
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
transcriptional regulator
13_1_20cm_2_scaffold_439_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

22821..23534
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000304C23D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
CBS domain-containing protein
13_1_20cm_2_scaffold_439_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

23522..23761
DNA (240bp) protein (80aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Streptomyces sp. SS RepID=UPI000365CB7A
2-oxoglutarate ferredoxin oxidoreductase subunit alpha
Displaying 24 items

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