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13_1_20cm_2_scaffold_4602

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4602_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2..628
DNA (627bp) protein (209aa)
ABC transporter sugar binding protein n=23 Tax=Xanthomonas RepID=Q8PK66_XANAC alias=16ft_combo_ws3_scaffold_136_31 id=5223542 tax=16ft_combo_ws3 species=Xanthomonas genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein Tax=RBG_16_RIF_WS3X_71_46_curated
ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_4602_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

827..1453
DNA (627bp) protein (209aa)
ABC-type sugar transport system permease subunit n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIU2_IGNAJ alias=16ft_combo_ws3_scaffold_136_30 id=5223541 tax=16ft_combo_ws3 species=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria
ABC-type sugar transport system permease subunit; K10189 lactose/L-arabinose transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
ABC-type sugar transport system permease subunit
13_1_20cm_2_scaffold_4602_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1450..2286
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSX8_PSEUU alias=16ft_combo_ws3_scaffold_136_29 id=5223540 tax=16ft_combo_ws3 species=Pseudoxanthomonas suwonensis (strain 11-1) genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
binding-protein-dependent transporters inner membrane component; K10190 lactose/L-arabinose transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_2_scaffold_4602_4
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2287..3639)
DNA (1353bp) protein (451aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Con
Beta-glucosidase n=4 Tax=Rhodanobacter RepID=I4WC45_9GAMM alias=16ft_combo_ws3_scaffold_136_27 id=5223538 tax=16ft_combo_ws3 species=Rhodanobacter genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria rbh
beta-glucosidase
13_1_20cm_2_scaffold_4602_5
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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3657..4733
DNA (1077bp) protein (359aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003786C2E
sugar ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
13_1_20cm_2_scaffold_4602_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4766..6007
DNA (1242bp) protein (414aa)
Trigger factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB45_GEMAT rbh
tig; trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Trigger factor
13_1_20cm_2_scaffold_4602_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6016..6633
DNA (618bp) protein (206aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB46_GEMAT
ATP-dependent Clp protease proteolytic subunit
13_1_20cm_2_scaffold_4602_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6675..7925
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB47_GEMAT
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP-dependent Clp protease ATP-binding subunit clpX
13_1_20cm_2_scaffold_4602_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8099..8572
DNA (474bp) protein (158aa)
Probable GTP-binding protein EngB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENGB_GEMAT
ribosome biogenesis GTP-binding protein YsxC Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
engB; putative GTP-binding protein EngB
13_1_20cm_2_scaffold_4602_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8569..9201
DNA (633bp) protein (211aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_4602_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9201..11099
DNA (1899bp) protein (633aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXH1_HERA2
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multi-sensor hybrid histidine kinase
13_1_20cm_2_scaffold_4602_12
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11278..11667)
DNA (390bp) protein (130aa)
Methylated-DNA--[protein]-cysteine S-methyltransferase, TIGR00589 family n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GEN3_9LEPT
methylated-DNA--protein-cysteine methyltransferase; K07443 methylated-DNA-protein-cysteine methyltransferase related protein Tax=CG_Anaero_02
Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein
13_1_20cm_2_scaffold_4602_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11711..12193)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB51_GEMAT
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NUDIX hydrolase
13_1_20cm_2_scaffold_4602_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12254..12529)
DNA (276bp) protein (92aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FA29_DESAA
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Tax=GWC2_Gemmatimonadetes_71_10_curated
winged helix family two component transcriptional regulator
13_1_20cm_2_scaffold_4602_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13233..14507
DNA (1275bp) protein (425aa)
Uncharacterized protein (Fragment) n=2 Tax=Yersinia pestis RepID=I7Q0U1_YERPE
Uncharacterized protein {ECO:0000313|EMBL:KKD56799.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltoph
13_1_20cm_2_scaffold_4602_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14588..16636)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A514_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_4602_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16682..17239
DNA (558bp) protein (186aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_4602_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17236..18741
DNA (1506bp) protein (502aa)
trpE; anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anthranilate synthase component I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB52_GEMAT
anthranilate synthase component I
13_1_20cm_2_scaffold_4602_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18757..19269
DNA (513bp) protein (171aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cya; adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB53_GEMAT
Displaying 19 items

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