ggKbase home page

13_1_20cm_2_scaffold_466

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_466_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..512)
DNA (510bp) protein (170aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
Putative phosphatase {ECO:0000313|EMBL:BAH37203.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
putative phosphatase
13_1_20cm_2_scaffold_466_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(533..1744)
DNA (1212bp) protein (404aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multidrug resistance protein
13_1_20cm_2_scaffold_466_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1741..3456)
DNA (1716bp) protein (572aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="
iron ABC transporter permease
13_1_20cm_2_scaffold_466_4
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3453..4430)
DNA (978bp) protein (326aa)
ABC transporter related protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BC73_MEISD
ABC-type spermidine/putrescine transport systems ATPase component {ECO:0000313|EMBL:AHY46446.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrob
ABC transporter-like protein
13_1_20cm_2_scaffold_466_5
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4427..5578)
DNA (1152bp) protein (384aa)
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein n=1 Tax=Desmospora sp. 8437 RepID=F5SGB3_9BACL
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein {ECO:0000313|EMBL:EGK11085.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;
extracellular solute-binding protein
13_1_20cm_2_scaffold_466_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5594..8071)
DNA (2478bp) protein (826aa)
Putative LmbE-like protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVE1_SOLCM alias=16ft_combo_ws3_scaffold_198_16 id=5224387 tax=16ft_combo_ws3 species=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes
LmbE family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
LmbE family protein
13_1_20cm_2_scaffold_466_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8071..9393)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000378ED36
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amidohydrolase
13_1_20cm_2_scaffold_466_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9491..11371
DNA (1881bp) protein (627aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO alias=16ft_combo_ws3_scaffold_551_6 id=5225245 tax=16ft_combo_ws3 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_466_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11393..11773)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00035DB205
S23 ribosomal protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_466_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11887..12549)
DNA (663bp) protein (221aa)
Phosphoribosyltransferase n=1 Tax=Saccharopolyspora erythraea D RepID=T2S427_SACER
phosphoribosyl transferase protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_466_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12688..13977
DNA (1290bp) protein (430aa)
gltA; citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JGW5_FRASC
13_1_20cm_2_scaffold_466_12
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(14086..15306)
DNA (1221bp) protein (407aa)
rhlE; ATP-dependent RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RBG_16_Acidobacteria_68_9_curated
ATP-dependent RNA helicase RhlE n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXJ0_JANMA
rhlE; ATP-dependent RNA helicase
13_1_20cm_2_scaffold_466_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15709..15906
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=1 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SMK5_THEAH
30S ribosomal protein S21 Tax=RBG_16_Gemmatimonadetes_66_8_curated
30S ribosomal protein S21
13_1_20cm_2_scaffold_466_14
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15923..16132
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAI3_GEMAT
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_13_Actinobacteria_63_9_curated
Cold-shock protein DNA-binding protein
13_1_20cm_2_scaffold_466_15
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(16207..16839)
DNA (633bp) protein (211aa)
Transcriptional regulator, XRE family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WL9_SOLUE
XRE family transcriptional regulator Tax=RBG_16_Aminicenantes_63_16_curated
XRE family transcriptional regulator
13_1_20cm_2_scaffold_466_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16929..17624)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0L2_ROSS1
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Surfeit locus 1 family protein
13_1_20cm_2_scaffold_466_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17621..17869)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030C1AB1
excinuclease ABC subunit C; K07461 putative endonuclease Tax=RBG_16_Anaeromyxobacter_69_14_curated
excinuclease ABC subunit C
13_1_20cm_2_scaffold_466_18
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17884..18312)
DNA (429bp) protein (143aa)
Peroxiredoxin, OsmC subfamily n=2 Tax=Thermus oshimai RepID=K7QTV8_THEOS
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AFV75481.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
peroxiredoxin, OsmC subfamily
13_1_20cm_2_scaffold_466_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18436..18915
DNA (480bp) protein (160aa)
Gll3737 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEZ0_GLOVI alias=16ft_combo_ws3_scaffold_2252_13 id=5224449 tax=16ft_combo_ws3 species=Gloeobacter violaceus (strain PCC 7421) genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glyoxalase-like domain protein
13_1_20cm_2_scaffold_466_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18970..20793
DNA (1824bp) protein (608aa)
Peptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME75_RHOM4
Peptidase {ECO:0000313|EMBL:AHG89716.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase
13_1_20cm_2_scaffold_466_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20823..21701)
DNA (879bp) protein (293aa)
Lysyl oxidase protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8HJ09_ACACA
Lysyl oxidase {ECO:0000313|EMBL:AHG92636.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Lysyl oxidase
13_1_20cm_2_scaffold_466_22
unknown

Not on your lists

comp(21845..22306)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_2_scaffold_466_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22300..23538)
DNA (1239bp) protein (413aa)
Regulator of chromosome condensation, RCC1 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQE9_ROSS1
regulator of chromosome condensation, RCC1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
regulator of chromosome condensation, RCC1
13_1_20cm_2_scaffold_466_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23690..27031
DNA (3342bp) protein (1114aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH24_RHOM4 rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY47809.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
TonB-dependent receptor plug
13_1_20cm_2_scaffold_466_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27061..28467
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI9_RHOMR
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG91388.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RagB/SusD domain-containing protein
Displaying 25 items

View Taxonomy