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13_1_20cm_2_scaffold_4692

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4692_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(1..402)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GEI8_9FIRM
4Fe-4S ferredoxin Tax=RBG_16_Euryarchaeota_68_12_curated
Fe-S oxidoreductase
13_1_20cm_2_scaffold_4692_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(510..1526)
DNA (1017bp) protein (339aa)
icd; isocitrate dehydrogenase, NADP; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_Euryarchaeota_68_13_curated
Isocitrate dehydrogenase [NADP] n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=IDH_ARCFU
icd; isocitrate dehydrogenase, NADP
13_1_20cm_2_scaffold_4692_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1759..2919)
DNA (1161bp) protein (387aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
citrate synthase (EC:2.3.3.1)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI0003671D62 rbh
13_1_20cm_2_scaffold_4692_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3024..3896)
DNA (873bp) protein (291aa)
ctaB2; protoheme IX farnesyltransferase (EC:2.5.1.-) Tax=RBG_16_Euryarchaeota_68_12_curated
protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase 1 n=2 Tax=Cenarchaeum symbiosum RepID=COXX1_CENSY
13_1_20cm_2_scaffold_4692_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(3930..4637)
DNA (708bp) protein (236aa)
Nth_1; EndoIII-related endonuclease; K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Euryarchaeota_68_12_curated
Predicted EndoIII-related endonuclease n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYU8_METKA
Nth_1; EndoIII-related endonuclease
13_1_20cm_2_scaffold_4692_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(4667..5506)
DNA (840bp) protein (280aa)
proline dehydrogenase (EC:1.5.99.8) Tax=RBG_16_Euryarchaeota_68_12_curated
proline dehydrogenase (EC:1.5.99.8)
Putative proline dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFP4_NITGG
13_1_20cm_2_scaffold_4692_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(5562..6020)
DNA (459bp) protein (153aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_4692_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6102..6509)
DNA (408bp) protein (136aa)
Putative nickel-responsive regulator n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T2F8_9EURY
Nickel responsive regulator NikR; K07722 CopG family transcriptional regulator, nickel-responsive regulator Tax=RBG_16_Euryarchaeota_67_27_curated
nickel responsive regulator
13_1_20cm_2_scaffold_4692_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6627..7355
DNA (729bp) protein (243aa)
protein UreH Tax=RBG_16_Euryarchaeota_68_12_curated
Protein UreH alias=gwa2_scaffold_1329_39 id=5045818 tax=GW2011_AR3 species=Bacillus sp. 1NLA3E genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_desc=gwa2_.43_13b
high-affinity nickel-transporter
13_1_20cm_2_scaffold_4692_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7416..7895
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DA4D7
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4692_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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8223..8591
DNA (369bp) protein (123aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00037EF1C0
tonoplast intrinsic protein (Aquaporin) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
MIP family channel protein
13_1_20cm_2_scaffold_4692_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8696..9499
DNA (804bp) protein (268aa)
oxidoreductase FAD/NAD(P)-binding; K03380 phenol 2-monooxygenase [EC:1.14.13.7] Tax=RBG_16_Euryarchaeota_68_12_curated
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT05_KORVE
oxidoreductase FAD/NAD(P)-binding protein
13_1_20cm_2_scaffold_4692_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9513..11111)
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A84E5
Uncharacterized protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_2_scaffold_4692_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(11176..11508)
DNA (333bp) protein (111aa)
Nickel-type superoxide dismutase maturation protease n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LIE7_9CHRO
nickel-type superoxide dismutase maturation protease Tax=RBG_16_Euryarchaeota_68_12_curated
peptidase S26
13_1_20cm_2_scaffold_4692_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(11505..12026)
DNA (522bp) protein (174aa)
Putative nickel-containing superoxide dismutase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C131_9FLAO alias=ACD50_94856.14174.8G0017,ACD50_94856.14174.8_17,ACD50_C00068G00017 id=72002 tax=ACD50 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes organism_group=OP11 organism_desc=OP11
nickel-dependent superoxide dismutase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
nickel-dependent superoxide dismutase
13_1_20cm_2_scaffold_4692_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12113..12778
DNA (666bp) protein (222aa)
DNA-(Apurinic or apyrimidinic site) lyase; K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=RBG_16_Euryarchaeota_68_12_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] alias=gwa2_scaffold_1239_50 id=5045631 tax=GW2011_AR5 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota organism_desc=gwa2_.48_18
DNA-(Apurinic or apyrimidinic site) lyase
13_1_20cm_2_scaffold_4692_17
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

12798..13868
DNA (1071bp) protein (357aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RBG_16_Euryarchaeota_68_12_curated
A/G-specific adenine glycosylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV4_RHOMR
A/G-specific adenine glycosylase
13_1_20cm_2_scaffold_4692_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

13916..14347
DNA (432bp) protein (144aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_4692_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14414..14605
DNA (192bp) protein (64aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_2_scaffold_4692_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14652..15182
DNA (531bp) protein (177aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPI1_ARCVS
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4692_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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15179..16240
DNA (1062bp) protein (354aa)
acetylornithine deacetylase (EC:3.5.1.16) Tax=RBG_16_Euryarchaeota_68_12_curated
acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase (Fragment) n=2 Tax=mine drainage metagenome RepID=T1BRT2_9ZZZZ
13_1_20cm_2_scaffold_4692_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(16233..16496)
DNA (264bp) protein (88aa)
aspartate/tyrosine/aromatic aminotransferase Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 22 items

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