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13_1_20cm_2_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_475_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(3..578)
DNA (576bp) protein (192aa)
Transposase, IS605 OrfB family n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFI2_ARCPA
transposase, IS605 OrfB family Tax=RBG_16_Thaumarchaeota_49_8_curated
putative transposase IS605 OrfB family
13_1_20cm_2_scaffold_475_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

927..1979
DNA (1053bp) protein (351aa)
priB; DNA primase, large subunit; K02685 DNA primase large subunit [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase large subunit PriL n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I855_METCZ
priB; DNA primase, large subunit
13_1_20cm_2_scaffold_475_3
RBG_16_Archaea_50_20_curated, Archaea

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1966..3180
DNA (1215bp) protein (405aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7C9_9ARCH
13_1_20cm_2_scaffold_475_4
RBG_16_Archaea_50_20_curated, Archaea

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4281..5072
DNA (792bp) protein (264aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=IF2A_METKA
translation initiation factor 2, subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=RBG_16_Archaea_50_20_curated
SUI2; translation initiation factor IF-2 subunit alpha
13_1_20cm_2_scaffold_475_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(5246..7555)
DNA (2310bp) protein (770aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5Y4_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_475_6
unknown

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comp(8010..8276)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_2_scaffold_475_7
unknown

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8996..9439
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_2_scaffold_475_8
unknown

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9496..10005
DNA (510bp) protein (170aa)

This feature has no annotations

13_1_20cm_2_scaffold_475_9
CG_Saphiro_01, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(10183..10971)
DNA (789bp) protein (263aa)
FkbM family methyltransferase Tax=CG_Saphiro_01
13_1_20cm_2_scaffold_475_trna_1
unknown

Not on your lists

comp(11681..11788)
DNA (108bp)
transferRNA
13_1_20cm_2_scaffold_475_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11855..12895)
DNA (1041bp) protein (347aa)
Phosphate uptake regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJW8_NITGG
Phosphate uptake regulator {ECO:0000313|EMBL:AFU60405.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
phoU1; phosphate uptake regulator
13_1_20cm_2_scaffold_475_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13403..14584
DNA (1182bp) protein (394aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL2_NITGG
Phosphate ABC transporter, periplasmic phosphate-binding protein {ECO:0000313|EMBL:AFU60488.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae;
pstC; phosphate ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_475_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14639..15655
DNA (1017bp) protein (339aa)
ABC phosphate uptake transporter, substrate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIL0_NITGG
ABC phosphate uptake transporter, substrate-binding protein {ECO:0000313|EMBL:AFU57922.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitro
pstS1; ABC phosphate uptake transporter, substrate-binding protein
13_1_20cm_2_scaffold_475_13
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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15658..16515
DNA (858bp) protein (286aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV89_9ARCH
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:EGP93204.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;"
pstA; Phosphate transport system permease protein PstA
13_1_20cm_2_scaffold_475_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

16512..17342
DNA (831bp) protein (277aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RBG_16_Thaumarchaeota_49_8_curated
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27)
ABC phosphate uptake transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI6_NITGG
13_1_20cm_2_scaffold_475_15
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17365..17988
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI000380DBDC
phosphate uptake regulator, PhoU Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate uptake regulator
13_1_20cm_2_scaffold_475_16
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18588..19424)
DNA (837bp) protein (279aa)
putative DNA methylase Tax=CG_Ignavi_01
hypothetical protein
DNA modification methylase-like protein alias=RBG9_65_67,RBG9_C00065G00067 id=1247695 tax=RBG9 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
13_1_20cm_2_scaffold_475_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

19843..23190
DNA (3348bp) protein (1116aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
13_1_20cm_2_scaffold_475_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

23193..27038
DNA (3846bp) protein (1282aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG
13_1_20cm_2_scaffold_475_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

27045..27353
DNA (309bp) protein (103aa)
50S ribosomal protein L30e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR6_METFV
50S ribosomal protein L30e; K02908 large subunit ribosomal protein L30e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L30e
13_1_20cm_2_scaffold_475_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

27639..28076
DNA (438bp) protein (146aa)
Putative transcription elongation factor n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BN37_HYPBU
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=RBG_16_Archaea_50_20_curated
nusA; putative transcription elongation factor
13_1_20cm_2_scaffold_475_21
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


28240..30396
DNA (2157bp) protein (719aa)
Ribosomal protein S12/S23 n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MB80_CALMQ rbh
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis
30S ribosomal protein S12
13_1_20cm_2_scaffold_475_22
unknown

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comp(30556..30702)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_2_scaffold_475_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(30762..31967)
DNA (1206bp) protein (402aa)
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RBG_13_Bathyarchaeota_46_16b_curated
glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GCST_HALOH
13_1_20cm_2_scaffold_475_24
unknown

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32345..32785
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_20cm_2_scaffold_475_25
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(32831..33283)
DNA (453bp) protein (151aa)
K+-transporting ATPase, c chain (EC:3.6.3.12)
Potassium-transporting ATPase subunit C n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MTH0_9EURY
Potassium-transporting ATPase subunit C {ECO:0000313|EMBL:EQB64625.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatal
13_1_20cm_2_scaffold_475_26
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(33296..35443)
DNA (2148bp) protein (716aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARC1_FERAC
hypothetical protein
13_1_20cm_2_scaffold_475_27
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(35454..37010)
DNA (1557bp) protein (519aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase A chain n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LA52_9EURY
hypothetical protein
13_1_20cm_2_scaffold_475_28

Not on your lists

comp(37219..37533)
DNA (315bp) protein (105aa)
AsnC family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0ZKG2_9ZZZZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQD45133.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AsnC family transcriptional regulator
13_1_20cm_2_scaffold_475_29
unknown

Not on your lists

37923..38234
DNA (312bp) protein (104aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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