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13_1_20cm_2_scaffold_48

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_48_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..2244)
DNA (2244bp) protein (748aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lon protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ4_SINAD
ATP-dependent protease La
13_1_20cm_2_scaffold_48_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2463..4292
DNA (1830bp) protein (610aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_20cm_2_scaffold_48_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4289..7372)
DNA (3084bp) protein (1028aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Spermine/spermidine synthase family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UB74_MYXSD alias=16ft_combo_ws3_scaffold_5011_39 id=5225169 tax=16ft_combo_ws3 species=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
spermine synthase
13_1_20cm_2_scaffold_48_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7362..9482)
DNA (2121bp) protein (707aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT rbh
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_20cm_2_scaffold_48_5
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(9520..11850)
DNA (2331bp) protein (777aa)
peptidase M1 membrane alanine aminopeptidase Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
peptidase M1 membrane alanine aminopeptidase alias=RBG1_290,RBG1_C00001G00290 id=1249848 tax=RBG1 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi
peptidase M1 membrane alanine aminopeptidase
13_1_20cm_2_scaffold_48_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11896..12378
DNA (483bp) protein (161aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_20cm_2_scaffold_48_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12395..14050)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG9_GEMAT
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
13_1_20cm_2_scaffold_48_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14060..14332)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_48_9
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14359..14889
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
Pfpi family intracellular protease
13_1_20cm_2_scaffold_48_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14866..16119)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_48_11
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

16138..16452
DNA (315bp) protein (105aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPU4_9BACL
MazG nucleotide pyrophosphohydrolase Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
MazG nucleotide pyrophosphohydrolase
13_1_20cm_2_scaffold_48_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16553..17311
DNA (759bp) protein (253aa)
id=4014690 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_48_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17322..18068
DNA (747bp) protein (249aa)
Phage shock protein A, PspA n=2 Tax=Rhodothermus marinus RepID=D0MK86_RHOM4
PspA/IM30 family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_48_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18099..19808
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000381117B
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
13_1_20cm_2_scaffold_48_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19816..20637
DNA (822bp) protein (274aa)
Integral membrane components of other binding-protein-dependent transport system n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VTT7_9FLAO alias=ACD39_C00466G00002,ACD39_332348.2520.6G0002,ACD39_332348.2520.6_2 id=46591 tax=ACD39 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes organism_desc=unknown
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Binding-protein-dependent transport systems inner membrane component
13_1_20cm_2_scaffold_48_16
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20640..21527
DNA (888bp) protein (296aa)
ABC transporter related n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSX9_9FIRM
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
ABC transporter
13_1_20cm_2_scaffold_48_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21579..22472
DNA (894bp) protein (298aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_48_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

22462..24252
DNA (1791bp) protein (597aa)
AAA family ATPase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CN83_MYXFH
ATPase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
AAA family ATPase
13_1_20cm_2_scaffold_48_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24262..24702)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=Q6N2F0_RHOPA
Uncharacterized protein {ECO:0000313|EMBL:CAE29541.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
hypothetical protein
13_1_20cm_2_scaffold_48_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24887..25819)
DNA (933bp) protein (311aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSGA_GEMAT
ribosome biogenesis GTPase RsgA
13_1_20cm_2_scaffold_48_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25810..26109)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_2_scaffold_48_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26139..27071)
DNA (933bp) protein (311aa)
Putative proline dehydrogenase {ECO:0000313|EMBL:BAH39895.1}; EC=1.5.5.2 {ECO:0000313|EMBL:BAH39895.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
putative proline dehydrogenase (EC:1.5.99.8)
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
13_1_20cm_2_scaffold_48_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(27093..29222)
DNA (2130bp) protein (710aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_20cm_2_scaffold_48_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29222..30481)
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_20cm_2_scaffold_48_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

30666..32291
DNA (1626bp) protein (542aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_20cm_2_scaffold_48_26
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32347..33252
DNA (906bp) protein (302aa)
cytochrome C n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378DB68
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24660.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
Cytochrome c family protein
13_1_20cm_2_scaffold_48_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33283..33978
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
hypothetical protein
13_1_20cm_2_scaffold_48_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

34789..35262
DNA (474bp) protein (158aa)
galactokinase (EC:2.7.1.6); K00849 galactokinase [EC:2.7.1.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
galactokinase n=1 Tax=Serinicoccus marinus RepID=UPI0003B74615
Galactokinase
13_1_20cm_2_scaffold_48_29
unknown

Not on your lists

comp(35303..35563)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 29 items

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