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13_1_20cm_2_scaffold_496

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_496_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..704
DNA (702bp) protein (234aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 n=1 Tax=Patulibacter americanus RepID=UPI0003B58852
13_1_20cm_2_scaffold_496_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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996..1562
DNA (567bp) protein (189aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate flavodoxin/ferredoxin oxidoreductase-like
13_1_20cm_2_scaffold_496_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1559..2788
DNA (1230bp) protein (410aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
13_1_20cm_2_scaffold_496_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2785..3819
DNA (1035bp) protein (345aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
2-oxoglutarate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX70_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
13_1_20cm_2_scaffold_496_5
CSP1_5_NC10, NC10, Bacteria

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3804..4736
DNA (933bp) protein (311aa)
Kelch repeat-containing protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHL5_9BACT
Kelch repeat-containing protein Tax=CSP1_5_NC10
Kelch repeat-containing protein
13_1_20cm_2_scaffold_496_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4786..5361
DNA (576bp) protein (192aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S9_GEMAT
hypothetical membrane protein; K02221 YggT family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_2_scaffold_496_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5361..5645
DNA (285bp) protein (95aa)
UPF0235 protein Dsui_0600 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFY9_AZOSU
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_496_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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5642..5995
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002F048D1
cupin Tax=GWC2_RIF_CHLX_73_18_curated
cupin domain-containing protein
13_1_20cm_2_scaffold_496_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5988..6998)
DNA (1011bp) protein (337aa)
qxtB; terminal oxidase subunit II (EC:1.10.3.-)
Cytochrome bd ubiquinol oxidase, subunit II n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PBK2_9DELT
Cytochrome bd ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EYF02949.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces
13_1_20cm_2_scaffold_496_10
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6995..8353)
DNA (1359bp) protein (453aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
Putative cytochrome bd menaquinol oxidase subunit I {ECO:0000313|EMBL:GAO03370.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacte
cytochrome bd ubiquinol oxidase subunit I
13_1_20cm_2_scaffold_496_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8368..9192)
DNA (825bp) protein (275aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_496_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9401..11236
DNA (1836bp) protein (612aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_cura
Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U0_GEMAT
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
13_1_20cm_2_scaffold_496_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11240..11893
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7Z9_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
13_1_20cm_2_scaffold_496_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11979..12413
DNA (435bp) protein (145aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_496_15
unknown

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12444..13169
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_20cm_2_scaffold_496_16
unknown

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13238..13402
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_2_scaffold_496_17

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13429..13848
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G8_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06427.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
integral membrane protein
13_1_20cm_2_scaffold_496_18
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13853..14542
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI45_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF09989.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
oxidoreductase
13_1_20cm_2_scaffold_496_19
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14539..15873
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B545DF
Uncharacterized protein {ECO:0000313|EMBL:AII53166.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
13_1_20cm_2_scaffold_496_20
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

15911..16462
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TBM3_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF26740.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gun
hypothetical protein
13_1_20cm_2_scaffold_496_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16465..16956
DNA (492bp) protein (164aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_496_22
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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16976..18127
DNA (1152bp) protein (384aa)
Chromate transporter n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) PF1_MYXFH">RepID=F8CPF1_MYXFH rbh
Chromate transporter {ECO:0000313|EMBL:AEI67913.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
chromate transporter
13_1_20cm_2_scaffold_496_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18114..18500)
DNA (387bp) protein (129aa)
RNA-binding S4 domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ35_HALO1
heat shock protein 15; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA-binding S4 domain-containing protein
13_1_20cm_2_scaffold_496_24
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

18547..20010
DNA (1464bp) protein (488aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7Y7_9DELT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
outer membrane efflux protein
Displaying 24 items

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