ggKbase home page

13_1_20cm_2_scaffold_4995

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4995_1
unknown

Not on your lists

3..68
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_20cm_2_scaffold_4995_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(489..2297)
DNA (1809bp) protein (603aa)
Copper resistance protein CopC n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA49_SPHTD
Copper resistance protein CopC {ECO:0000313|EMBL:ACZ40692.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacterace
copper resistance protein CopC
13_1_20cm_2_scaffold_4995_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2335..2994)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB69_THET1
Uncharacterized protein {ECO:0000313|EMBL:ACZ42034.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
hypothetical protein
13_1_20cm_2_scaffold_4995_4
unknown

Not on your lists

comp(3044..3406)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_20cm_2_scaffold_4995_5

Not on your lists


comp(3453..4553)
DNA (1101bp) protein (367aa)
Protein RecA n=1 Tax=Thermincola potens (strain JR) RepID=D5XER8_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:KKL95270.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein RecA
13_1_20cm_2_scaffold_4995_6

Not on your lists

comp(4669..4869)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RK61_MOOTA
Uncharacterized protein {ECO:0000313|EMBL:KKL95269.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_4995_7

Not on your lists

comp(4920..5726)
DNA (807bp) protein (269aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=uncultured Chloroflexi bacterium HF0500_03M05 RepID=E0XY57_9CHLR alias=scaffold_1_134,RBG2_C00001G00134 id=1241113 tax=RBG2 species=uncultured Chloroflexi bacterium HF0500_03M05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi
Uncharacterized protein {ECO:0000313|EMBL:KKL95268.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_4995_8
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6093..7280
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003674B93
Uncharacterized protein {ECO:0000313|EMBL:EOS53609.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
transcriptional regulator
13_1_20cm_2_scaffold_4995_9

Not on your lists

7375..7737
DNA (363bp) protein (121aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=uncultured bacterium RepID=K2DRA6_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EKD99606.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_2_scaffold_4995_10

Not on your lists

7739..8155
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Klebsiella oxytoca 10-5242 RepID=H3L859_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:KKK86173.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glyoxalase
13_1_20cm_2_scaffold_4995_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8152..8613
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003802ED5
phenylacetic acid degradation-related protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phenylacetic acid degradation-related protein
13_1_20cm_2_scaffold_4995_12

Not on your lists

8597..9403
DNA (807bp) protein (269aa)
short-chain dehydrogenase (EC:1.1.1.-)
3-oxoacyl-ACP reductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B49316
Uncharacterized protein {ECO:0000313|EMBL:KKL66052.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_4995_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9403..9861
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI000366BEDD
pyridoxamine 5'-phosphate oxidase-related fmn-binding protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_20cm_2_scaffold_4995_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9863..10492
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003612996
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_4995_15

Not on your lists

10452..10772
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL66053.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_4995_16

Not on your lists

10783..11484
DNA (702bp) protein (234aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK76704.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_4995_17

Not on your lists

comp(11519..11824)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL23915.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_4995_18
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(11908..12291)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NCI5_9ACTO
hypothetical protein Tax=RBG_16_Chloroflexi_60_22_curated
cupin 2 barrel domain-containing protein
13_1_20cm_2_scaffold_4995_19
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(12298..13179)
DNA (882bp) protein (294aa)
Metal-dependent hydrolase, beta-lactamase superfamily II n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RMG4_MYCRN
beta-lactamase superfamily metal-dependent hydrolase; K06897 Tax=RBG_16_Chloroflexi_64_32_curated
beta-lactamase superfamily metal-dependent hydrolase
13_1_20cm_2_scaffold_4995_20
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(13348..14232)
DNA (885bp) protein (295aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RBG_16_Chloroflexi_64_32_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=7 Tax=Clostridium thermocellum RepID=A3DBG5_CLOTH
Displaying 20 items

View Taxonomy