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13_1_20cm_2_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5_1
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(393..2357)
-----------------
DNA (1965bp)
protein (655aa)
putative S9 family peptidase (EC:3.4.-.-)
Acylaminoacyl-peptidase n=1 Tax=Desmospora sp. 8437 RepID=F5SEA6_9BACL
Acylaminoacyl-peptidase {ECO:0000313|EMBL:EGK12565.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
13_1_20cm_2_scaffold_5_2
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2385..2891)
-----------------
DNA (507bp)
protein (169aa)
ribose-5-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
Protein tyrosine phosphatase n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TL57_CALOO
protein tyrosine phosphatase
13_1_20cm_2_scaffold_5_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


3041..3628
-----------------
DNA (588bp)
protein (196aa)
30S ribosomal protein S7 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BN40_HYPBU
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S7P
13_1_20cm_2_scaffold_5_4
unknown

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comp(3625..3891)
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

13_1_20cm_2_scaffold_5_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

4018..5934
-----------------
DNA (1917bp)
protein (639aa)
UPI0003D1BEB0 related cluster n=1 Tax=unknown RepID=UPI0003D1BEB0
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_2_scaffold_5_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

5906..7828
-----------------
DNA (1923bp)
protein (641aa)
Putative uncharacterized protein n=1 Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YIQ1_METS5
hypothetical protein; K06915 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_5_7
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7959..8498)
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LJ48_METBM
Uncharacterized protein {ECO:0000313|EMBL:CCJ35632.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
hypothetical protein
13_1_20cm_2_scaffold_5_trna_1
unknown

Not on your lists

comp(8719..8846)
-----------------
DNA (128bp)
transferRNA
13_1_20cm_2_scaffold_5_8
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10177..11094)
-----------------
DNA (918bp)
protein (306aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFI5_THEPJ
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ADG82406.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola
DNA polymerase LigD, polymerase domain-containing protein
13_1_20cm_2_scaffold_5_9
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11212..11994
-----------------
DNA (783bp)
protein (261aa)
Probable DNA repair protein AF_1726 n=2 Tax=Archaeoglobus fulgidus RepID=Y1726_ARCFU
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archae
hypothetical protein
13_1_20cm_2_scaffold_5_10
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11991..12956
-----------------
DNA (966bp)
protein (322aa)
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase, putative {ECO:0000313|EMBL:AAB89526.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (stra
DNA ligase
13_1_20cm_2_scaffold_5_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13060..13248
-----------------
DNA (189bp)
protein (63aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037CB871
Zn-ribbon RNA-binding protein; K07580 hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
Zn-ribbon RNA-binding protein
13_1_20cm_2_scaffold_5_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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13263..13532
-----------------
DNA (270bp)
protein (90aa)
Elongation factor 1-beta n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=RBG_16_Bathyarchaeota_48_13_curated
ef1B; elongation factor 1-beta
13_1_20cm_2_scaffold_5_13
unknown

Not on your lists

13605..14033
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_5_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

14133..16307
-----------------
DNA (2175bp)
protein (725aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
Cell division protein FtsH
13_1_20cm_2_scaffold_5_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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16339..16569
-----------------
DNA (231bp)
protein (77aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_5_16
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16647..16949
-----------------
DNA (303bp)
protein (101aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
Thioredoxin
13_1_20cm_2_scaffold_5_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17048..18145
-----------------
DNA (1098bp)
protein (366aa)
Phosphate regulatory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N322_9ARCH
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
13_1_20cm_2_scaffold_5_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18462..19760
-----------------
DNA (1299bp)
protein (433aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARD4_9ARCH
TIGR00299 family protein {ECO:0000313|EMBL:AIF84821.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nit
TIGR00299 family protein
13_1_20cm_2_scaffold_5_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

19791..20516
-----------------
DNA (726bp)
protein (242aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_5_20
unknown

Not on your lists

comp(20544..20819)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_5_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

21018..22685
-----------------
DNA (1668bp)
protein (556aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_5_22
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22715..23917)
-----------------
DNA (1203bp)
protein (401aa)
Saccharopine dehydrogenase n=1 Tax=uncultured microorganism RepID=K0J395_9ZZZZ
putative L-lysine 6-dehydrogenase Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
putative L-lysine 6-dehydrogenase
13_1_20cm_2_scaffold_5_23
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

23941..24519
-----------------
DNA (579bp)
protein (193aa)
Nucleoside-triphosphatase N186_06370 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phospho
Nucleoside-triphosphatase N186_06370 n=1 Tax=Thermofilum sp. 1910b RepID=S6A5T0_9CREN
putative NTPase
13_1_20cm_2_scaffold_5_24
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

24516..25181
-----------------
DNA (666bp)
protein (222aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=529709 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AIQ2_PYRYC
ribonuclease HII
13_1_20cm_2_scaffold_5_25
unknown

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25325..25837
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

13_1_20cm_2_scaffold_5_26
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(25853..26389)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
hypothetical protein
13_1_20cm_2_scaffold_5_27
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(26641..27348)
-----------------
DNA (708bp)
protein (236aa)
sipW; signal peptidase I (EC:3.4.21.89); K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
putative signal peptidase I
13_1_20cm_2_scaffold_5_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(27366..27725)
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000381A388
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-binding protein
13_1_20cm_2_scaffold_5_29
unknown

Not on your lists

comp(27859..28131)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

Displaying items 1-30 of 108 in total

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