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13_1_20cm_2_scaffold_5004

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5004_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1..564
DNA (564bp) protein (188aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-
Riboflavin biosynthesis protein RibD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F3_GEMAT
riboflavin biosynthesis protein RibD
13_1_20cm_2_scaffold_5004_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

546..1148
DNA (603bp) protein (201aa)
ribE; riboflavin synthase alpha chain (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Riboflavin synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F4_GEMAT
Lumazine-binding domain protein
13_1_20cm_2_scaffold_5004_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1130..2335
DNA (1206bp) protein (402aa)
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II (EC:3.5.4.25 4.1.99.12); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F5_GEMAT
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_20cm_2_scaffold_5004_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2338..2823
DNA (486bp) protein (162aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=GWC2_Gemmatimonadetes_71_10_curated
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B4437F
13_1_20cm_2_scaffold_5004_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2804..3217
DNA (414bp) protein (138aa)
N utilization substance protein B homolog n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUSB_SOLUE
nusB; antitermination protein NusB; K03625 N utilization substance protein B Tax=GWC2_Gemmatimonadetes_71_10_curated
N utilization substance protein B-like protein
13_1_20cm_2_scaffold_5004_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3214..4329
DNA (1116bp) protein (372aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F8_GEMAT
glycosyl transferase group 1
13_1_20cm_2_scaffold_5004_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4334..4654
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_5004_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4651..5619
DNA (969bp) protein (323aa)
hprK; HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HPr kinase/phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8F9_GEMAT
hprK; HPr kinase/phosphorylase
13_1_20cm_2_scaffold_5004_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5612..5989
DNA (378bp) protein (126aa)
phosphotransferase system enzyme IIA component; K02744 PTS system, N-acetylgalactosamine-specific IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphotransferase system enzyme IIA component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G0_GEMAT
PTS system fructose subfamily IIA component
13_1_20cm_2_scaffold_5004_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5986..6459
DNA (474bp) protein (158aa)
Phosphotransferase system enzyme IIB component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G1_GEMAT
phosphotransferase system enzyme IIB component Tax=GWC2_Gemmatimonadetes_71_10_curated
PTS system sorbose subfamily IIB component
13_1_20cm_2_scaffold_5004_11
unknown

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comp(6345..6878)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_2_scaffold_5004_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7057..7812
DNA (756bp) protein (252aa)
Phosphotransferase system enzyme IID component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G3_GEMAT
phosphotransferase system enzyme IID component; K02796 PTS system, mannose-specific IID component Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphotransferase system enzyme IID component
13_1_20cm_2_scaffold_5004_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7803..8138
DNA (336bp) protein (112aa)
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Phosphotransferase system, phosphocarrier protein HPr alias=gwe2_scaffold_515_9 id=2070136 tax=TA06 species=Chthoniobacter flavus Ellin428 genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia
HPrNtr
13_1_20cm_2_scaffold_5004_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8812..9870
DNA (1059bp) protein (353aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT
phosphoenolpyruvate-protein phosphotransferase
13_1_20cm_2_scaffold_5004_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9884..11098
DNA (1215bp) protein (405aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
S-adenosylmethionine synthase
13_1_20cm_2_scaffold_5004_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11095..12444
DNA (1350bp) protein (450aa)
Adenosylhomocysteinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FF04_9DELT
adenosylhomocysteinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
adenosylhomocysteinase
13_1_20cm_2_scaffold_5004_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12459..12956
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF151
13_1_20cm_2_scaffold_5004_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13089..13490
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 18 items

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