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13_1_20cm_2_scaffold_5387

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5387_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3..803)
DNA (801bp) protein (267aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=CG_Anaero_02
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4F271_BRARP
acetylornithine and succinylornithine aminotransferase
13_1_20cm_2_scaffold_5387_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(847..1611)
DNA (765bp) protein (255aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Acetylglutamate kinase n=2 Tax=Chloroflexus RepID=ARGB_CHLAA
acetylglutamate kinase
13_1_20cm_2_scaffold_5387_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1709..2668)
DNA (960bp) protein (320aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
13_1_20cm_2_scaffold_5387_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2720..3778)
DNA (1059bp) protein (353aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
13_1_20cm_2_scaffold_5387_5
unknown

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comp(3798..4691)
DNA (894bp) protein (298aa)

This feature has no annotations

13_1_20cm_2_scaffold_5387_6
unknown

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comp(4669..5013)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_2_scaffold_5387_7
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5010..5666)
DNA (657bp) protein (219aa)
Glycosyl transferase family 2 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X4F5_DESRD
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACV69429.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Des
family 2 glycosyl transferase
13_1_20cm_2_scaffold_5387_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5794..6858
DNA (1065bp) protein (355aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative asparaginase
13_1_20cm_2_scaffold_5387_9

Not on your lists

6995..8119
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039CF91F
Uncharacterized protein {ECO:0000313|EMBL:AIA10983.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_2_scaffold_5387_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8112..9248)
DNA (1137bp) protein (379aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Saccharopine dehydrogenase
13_1_20cm_2_scaffold_5387_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9386..9973
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3VXL3_9LEPT
TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TetR family transcriptional regulator
13_1_20cm_2_scaffold_5387_12
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9888..11150)
DNA (1263bp) protein (421aa)
Serine/threonine protein phosphatase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWS7_CORCM
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AFE10680.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;
yaeI2; serine/threonine protein phosphatase
13_1_20cm_2_scaffold_5387_13
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11194..12504
DNA (1311bp) protein (437aa)
Putative tricorn protease {ECO:0000313|EMBL:KFC67950.1}; EC=3.4.21.- {ECO:0000313|EMBL:KFC67950.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacterac
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003773704
hypothetical protein
13_1_20cm_2_scaffold_5387_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12512..13312)
DNA (801bp) protein (267aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=GWC2_Gemmatimonadetes_71_10_curated
Carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9Q3_9BACT
13_1_20cm_2_scaffold_5387_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13302..14414)
DNA (1113bp) protein (371aa)
L-sorbosone dehydrogenase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QKW9_9CYAN
L-sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
L-sorbosone dehydrogenase
13_1_20cm_2_scaffold_5387_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14495..15328)
DNA (834bp) protein (278aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
Displaying 16 items

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