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13_1_20cm_2_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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234..761
DNA (528bp) protein (176aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_6_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(712..981)
DNA (270bp) protein (90aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_6_3
RBG_16_Archaea_50_20_curated, Archaea

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1224..1769
DNA (546bp) protein (182aa)
Putative uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_6_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1776..2321
DNA (546bp) protein (182aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_6_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2389..3492
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8P6_9ARCH
NurA domain-containing protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_6_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3493..4920
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=uncultured crenarchaeote RepID=Q702D6_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative ATPase
13_1_20cm_2_scaffold_6_7
R_OD1_Yanofskybacteria_43_10b, Yanofskybacteria, Parcubacteria, Bacteria

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comp(4913..5707)
DNA (795bp) protein (265aa)
putative 3-demethylubiquinol 3-O-methyltransferase (EC:2.1.1.64)
Putative 3-demethylubiquinol 3-O-methyltransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5I2_9PROT
3-demethylubiquinone-9 3-methyltransferase Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_43_10b_curated
13_1_20cm_2_scaffold_6_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5889..6746
DNA (858bp) protein (286aa)
Putative dihydroorotate dehydrogenase electron transfer subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU29_9ARCH
oxidoreductase FAD/NAD(P)-binding subunit Tax=CSP1_1_Thaumarchaeota
oxidoreductase NAD-binding domain protein
13_1_20cm_2_scaffold_6_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6601..8235)
DNA (1635bp) protein (545aa)
Putative cysteine synthase {ECO:0000313|EMBL:AIC16006.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AIC16006.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerac
cysM1; putative cysteine synthase (EC:2.5.1.47)
Pyridoxal-phosphate dependent protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E4Y3_9ARCH
13_1_20cm_2_scaffold_6_10
RBG_16_Archaea_50_20_curated, Archaea

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8292..8630
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DII7_9EURY
Putative uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_6_11
unknown

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8725..9255
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_20cm_2_scaffold_6_12
unknown

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9252..9818
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_20cm_2_scaffold_6_13
unknown

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comp(9904..10404)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_2_scaffold_6_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(10406..11122)
DNA (717bp) protein (239aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK29_ACIS0
serine/threonine protein kinase involved in cell cycle control Tax=RBG_16_Archaea_50_20_curated
serine/threonine protein kinase involved in cell cycle control
13_1_20cm_2_scaffold_6_15
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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12150..13325
DNA (1176bp) protein (392aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00038245FD
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACF13048.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (stra
family 2 glycosyl transferase
13_1_20cm_2_scaffold_6_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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13356..14963
DNA (1608bp) protein (536aa)
ELP3; RNA polymerase II complex ELP3 subunit; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ELP3 component of the RNA polymerase II complex, consists of an N-terminal BioB/LipA-like domain and a C-terminal histone acetylase domain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TWI2_METKA
ELP3; RNA polymerase II complex ELP3 subunit
13_1_20cm_2_scaffold_6_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15001..16335
DNA (1335bp) protein (445aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI00037B0CDE
glutamyl-tRNA(Gln) amidotransferase subunit D
13_1_20cm_2_scaffold_6_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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16519..18240
DNA (1722bp) protein (574aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX39_THEPD rbh
glutamyl-tRNA(Gln) amidotransferase Tax=RBG_13_Bathyarchaeota_38_9_curated
glutamyl-tRNA(Gln) amidotransferase subunit E
13_1_20cm_2_scaffold_6_19

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18285..18722
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Archaea RepID=UPI0003808D41
Marine sediment metagenome DNA, contig: S01H1_L05582 {ECO:0000313|EMBL:GAF82676.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative HTH-type transcriptional regulator
13_1_20cm_2_scaffold_6_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(19197..20036)
DNA (840bp) protein (280aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20) Tax=RBG_16_Thaumarchaeota_49_8_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ2_NITGG
13_1_20cm_2_scaffold_6_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(20014..21132)
DNA (1119bp) protein (373aa)
trpB; tryptophan synthase subunit beta (EC:4.1.2.20) Tax=RBG_16_Archaea_50_20_curated
trpB; tryptophan synthase subunit beta (EC:4.1.2.20)
Tryptophan synthase beta chain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBB0_NITGG
13_1_20cm_2_scaffold_6_22
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(21216..21992)
DNA (777bp) protein (259aa)
Indole-3-glycerol-phosphate synthase {ECO:0000313|EMBL:ABX12810.1}; EC=4.1.1.48 {ECO:0000313|EMBL:ABX12810.1};; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitr
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol-phosphate synthase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A299_NITMS
13_1_20cm_2_scaffold_6_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(21996..23021)
DNA (1026bp) protein (342aa)
trpGD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase (EC:4.1.3.27); K13497 anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] Tax=RBG_16_Archaea_50
Anthranilate phosphoribosyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TRPD_SYMTH
anthranilate phosphoribosyltransferase
13_1_20cm_2_scaffold_6_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(23408..24220)
DNA (813bp) protein (271aa)
fructose bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Archaea_50_20_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NHZ5_METST
13_1_20cm_2_scaffold_6_25
RBG_16_Archaea_50_20_curated, Archaea

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24712..26490
DNA (1779bp) protein (593aa)
GlmS; glucosamine 6-phosphate synthetase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_Archaea_50_20_curated
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00036C48FC
13_1_20cm_2_scaffold_6_26
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

26940..27884
DNA (945bp) protein (315aa)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:ABQ89545.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABQ89545.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexin
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USE2_ROSS1 rbh
LPPG:FO 2-phospho-L-lactate transferase
13_1_20cm_2_scaffold_6_27
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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27881..28543
DNA (663bp) protein (221aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=112989
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGC4_9CHLR
hypothetical protein
13_1_20cm_2_scaffold_6_28
Aigarchaeota archaeon SCGC AAA471-E16, Thaumarchaeota, Archaea

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28619..29296
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-E16 RepID=UPI000381BC1C
13_1_20cm_2_scaffold_6_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(29282..30127)
DNA (846bp) protein (282aa)
purA; adenylosuccinate synthase (EC:6.3.4.4) Tax=RBG_13_Bathyarchaeota_38_9_curated
purA; Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUA8_9ARCH
13_1_20cm_2_scaffold_6_30
RBG_16_Archaea_50_20_curated, Archaea

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comp(30591..31481)
DNA (891bp) protein (297aa)
Sec-independent protein translocase protein TatC n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D1_9ARCH
Sec-independent protein secretion pathway component TatC; K03118 sec-independent protein translocase protein TatC Tax=RBG_16_Archaea_50_20_curated
sec-independent protein translocase protein TatC
Displaying items 1-30 of 70 in total

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