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13_1_20cm_2_scaffold_604

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_604_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1..873)
DNA (873bp) protein (291aa)
Radical SAM domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C878_SPHTD
Radical SAM domain-containing protein Tax=CSP1_6_Rokubacteria
Radical SAM domain-containing protein
13_1_20cm_2_scaffold_604_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

978..1910
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AD56D
Uncharacterized protein {ECO:0000313|EMBL:ABA47896.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
hypothetical protein
13_1_20cm_2_scaffold_604_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1760..2140)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A937_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_2_scaffold_604_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2137..3531)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A938_GEMAT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM65901.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
protein of unknown function DUF1446
13_1_20cm_2_scaffold_604_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3528..6326)
DNA (2799bp) protein (933aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ial:IALB_3165 Subtilisin-like serine protease alias=RAAC39_AAC7_scaffold_131_132,RAAC39_C00005G00132 id=718195 tax=RAAC39 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria rbh
subtilisin-like serine protease
13_1_20cm_2_scaffold_604_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6323..7903)
DNA (1581bp) protein (527aa)
putative acyl-CoA carboxylase beta subunit (EC:6.4.1.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative acyl-CoA carboxylase beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A939_GEMAT
carboxyl transferase
13_1_20cm_2_scaffold_604_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7937..8353)
DNA (417bp) protein (139aa)
Putative isobutyryl-CoA mutase small subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A940_GEMAT
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:AHG90884.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Methylmalonyl-CoA mutase domain-containing protein
13_1_20cm_2_scaffold_604_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8353..9465)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UUE0_9AQUI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_604_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9469..11034)
DNA (1566bp) protein (522aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methylmalonyl-CoA mutase n=1 Tax=Desulfurispora thermophila RepID=UPI0003649C1D
methylmalonyl-CoA mutase, large subunit
13_1_20cm_2_scaffold_604_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11031..12092)
DNA (1062bp) protein (354aa)
putative transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transport system kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
LAO/AO transport system ATPase
13_1_20cm_2_scaffold_604_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12135..13334)
DNA (1200bp) protein (400aa)
membrane protein n=1 Tax=Salinispora pacifica RepID=UPI0003702351
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
tlyC; hypothetical protein
13_1_20cm_2_scaffold_604_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13331..14506)
DNA (1176bp) protein (392aa)
Transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transporter-associated region
13_1_20cm_2_scaffold_604_13
unknown

Not on your lists

14530..14751
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_2_scaffold_604_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14703..17072)
DNA (2370bp) protein (790aa)
7TM receptor with intracellular metal dependent phosphohydrolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKE6_RHOMR
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
metal dependent phosphohydrolase
13_1_20cm_2_scaffold_604_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17074..18024)
DNA (951bp) protein (317aa)
PhoH-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH family protein {ECO:0000313|EMBL:AHG90892.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PhoH family protein
13_1_20cm_2_scaffold_604_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(18036..19805)
DNA (1770bp) protein (590aa)
Aspartate--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aspartyl-tRNA synthetase
13_1_20cm_2_scaffold_604_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19811..20260)
DNA (450bp) protein (150aa)
ptsN; phosphotransferase system enzyme IIA, regulates nitrogen metabolism; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ48_RHOM4
PTS IIA-like nitrogen-regulatory protein PtsN
13_1_20cm_2_scaffold_604_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20449..21144
DNA (696bp) protein (232aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_604_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21141..22229
DNA (1089bp) protein (363aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RLMN_GEMAT
hypothetical protein
13_1_20cm_2_scaffold_604_20
unknown

Not on your lists

comp(22167..22577)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_2_scaffold_604_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22553..23050)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_20cm_2_scaffold_604_22
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(23156..24028)
DNA (873bp) protein (291aa)
pantoate/beta-alanine ligase; K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=GWC2_Nitrospirae_56_14_curated
Pantothenate synthetase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=PANC_PELTS
panC; pantoate--beta-alanine ligase
13_1_20cm_2_scaffold_604_23
unknown

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comp(24087..24452)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_2_scaffold_604_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24554..24964)
DNA (411bp) protein (137aa)
PrcB C-terminal domain protein
PrcB C-terminal domain protein {ECO:0000313|EMBL:AHG89240.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 24 items

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